Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6c17
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.6  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 633 IHCYGTRLHCTVLYNYWLSIRCYTIWHYSI 544
           ++C+ + L  +VL + W S  C  ++ + I
Sbjct: 548 LYCWSSFLKISVLQSLWASPTCDLMYEFQI 577


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 488 YSVRNTCRDLLVQLLS 535
           Y+  NTCR  L  LLS
Sbjct: 93  YNTLNTCRSALALLLS 108


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory
          receptor candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 69 NITKFIRKILTLLYCLAC 16
          N  K I K+LT+L  L+C
Sbjct: 13 NSLKCITKVLTILGLLSC 30


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory
          receptor candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 69 NITKFIRKILTLLYCLAC 16
          N  K I K+LT+L  L+C
Sbjct: 9  NSLKCITKVLTILGLLSC 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,062
Number of Sequences: 336
Number of extensions: 3181
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)