Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6c17
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0134 + 21065104-21065965,21066732-21066961,21067618-210678...    29   4.7  
03_02_0287 + 7104144-7106069                                           28   6.2  

>09_06_0134 +
           21065104-21065965,21066732-21066961,21067618-21067841,
           21067929-21068781
          Length = 722

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 138 RNIMFVFHNFTCPVY-KLNIDNQRNITKFIRKILTLLYCLACDAIYV 1
           R IMF  ++FTCP Y K   D QR+ T  ++    L    +C  IYV
Sbjct: 455 RQIMFEVNSFTCPAYGKFCNDAQRHAT--LKLEAELRNWRSCFMIYV 499


>03_02_0287 + 7104144-7106069
          Length = 641

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -1

Query: 207 SHPKT--IFLLLKKPIIRMKKL*FIRNIMFVFHN 112
           SHPK   I+ LLKK  ++M +  ++ +I FV H+
Sbjct: 527 SHPKADEIYALLKKLYVKMVEEGYVADIEFVLHD 560


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,269,091
Number of Sequences: 37544
Number of extensions: 240862
Number of successful extensions: 381
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)