Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6c11
(741 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5; Nucleopo... 278 9e-74
UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7; Nucleopo... 138 1e-31
UniRef50_P17500 Cluster: Major capsid protein; n=15; Nucleopolyh... 79 1e-13
UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis bil... 64 5e-09
UniRef50_Q77K64 Cluster: Cg30 protein; n=3; Nucleopolyhedrovirus... 63 6e-09
UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: C... 62 1e-08
UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum nucleopolyhe... 60 4e-08
UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua MNPV... 53 9e-06
UniRef50_P35840 Cluster: Major capsid protein; n=12; Nucleopolyh... 47 6e-04
UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP... 40 0.049
UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura granulov... 38 0.26
UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata nucleopolyh... 38 0.34
UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|R... 38 0.34
UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG... 37 0.60
UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, wh... 36 1.0
UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata ... 35 1.8
UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxoph... 35 1.8
UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.8
UniRef50_UPI00006CD331 Cluster: hypothetical protein TTHERM_0027... 35 2.4
UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12... 34 3.2
UniRef50_O16616 Cluster: Putative uncharacterized protein; n=2; ... 34 3.2
UniRef50_A5DYZ5 Cluster: Putative uncharacterized protein; n=1; ... 34 3.2
UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to ubiquitin-... 34 4.2
UniRef50_A5KNN5 Cluster: Putative uncharacterized protein; n=1; ... 34 4.2
UniRef50_A2EN30 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_Q57252 Cluster: Uncharacterized protein HI1163; n=120; ... 33 5.6
UniRef50_Q20323 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
UniRef50_Q5I3L9 Cluster: Aec44; n=1; Escherichia coli|Rep: Aec44... 33 9.7
UniRef50_A6LT35 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q54MP5 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4... 33 9.7
>UniRef50_Q90173 Cluster: Zinc finger protein CG30; n=5;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 266
Score = 278 bits (682), Expect = 9e-74
Identities = 139/163 (85%), Positives = 144/163 (88%), Gaps = 1/163 (0%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
MEFVKLQCNICFSVAEIKNYFMQPIDRLT+IPVLELDTCKHQLCSMC PCP
Sbjct: 1 MEFVKLQCNICFSVAEIKNYFMQPIDRLTMIPVLELDTCKHQLCSMCIRKIRKRKKTPCP 60
Query: 433 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDS 612
LCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKIN NFDAASLASVLFEKSLLDDAEDS
Sbjct: 61 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINGNFDAASLASVLFEKSLLDDAEDS 120
Query: 613 NNAANSDDTMLSESQAILKK-AADRHCRTKRSSTLKRQLDLNK 738
NNAANSDDTMLSESQAILKK AD +T+ + +KRQLDLNK
Sbjct: 121 NNAANSDDTMLSESQAILKKLQADIAEQTQLN--IKRQLDLNK 161
>UniRef50_O10339 Cluster: Zinc finger protein CG30; n=7;
Nucleopolyhedrovirus|Rep: Zinc finger protein CG30 -
Orgyia pseudotsugata multicapsid polyhedrosis virus
(OpMNPV)
Length = 249
Score = 138 bits (335), Expect = 1e-31
Identities = 65/134 (48%), Positives = 88/134 (65%), Gaps = 3/134 (2%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC---XXXXXXXXXX 423
M+ V+LQC+IC SV EIKNYF+QP+D +TI+P++EL TC+HQLC MC
Sbjct: 1 MDTVRLQCHICCSVGEIKNYFLQPVDAITILPIVELHTCRHQLCVMCVRKIAQRGRDKRV 60
Query: 424 PCPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDA 603
CP+CR ++ HFNVYS+NRN VDV++CSV V + + DAASLA LFE SLL+
Sbjct: 61 ECPMCRRKNAHFNVYSVNRNSVDVLRCSVADVREHGRFGGLADAASLARGLFEPSLLEAE 120
Query: 604 EDSNNAANSDDTML 645
+N+ ++ L
Sbjct: 121 PAPDNSFGPNELQL 134
>UniRef50_P17500 Cluster: Major capsid protein; n=15;
Nucleopolyhedrovirus|Rep: Major capsid protein - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 351
Score = 78.6 bits (185), Expect = 1e-13
Identities = 35/49 (71%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
Frame = +2
Query: 2 RNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLR-NDFI 145
RNVLKFEGDTR L+RTL YEEYP YVPLFLGYQ++N +N+ LR N+F+
Sbjct: 268 RNVLKFEGDTRALERTLGRYEEYPMYVPLFLGYQLVNLQNDILRANNFL 316
>UniRef50_Q0N424 Cluster: Cg30/ac88-like protein; n=1; Clanis
bilineata nucleopolyhedrosis virus|Rep: Cg30/ac88-like
protein - Clanis bilineata nucleopolyhedrosis virus
Length = 346
Score = 63.7 bits (148), Expect = 5e-09
Identities = 31/132 (23%), Positives = 60/132 (45%)
Frame = +1
Query: 256 EFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPL 435
E V L C +C S + I + + D + P+ +L +C H +C +C CPL
Sbjct: 39 EQVTLSCCVCLSESTINDTKDELDDNMFAFPLAQLVSCLHSICVVCAVSLKQRQVISCPL 98
Query: 436 CRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSN 615
CR +S ++++N+ + ++ +T + + + + A LFE S+ A S
Sbjct: 99 CRTQSNKLVLFNVNKQTLMGVQVPITLIKSYGRYANRISTVECAKKLFETSIATSATPST 158
Query: 616 NAANSDDTMLSE 651
+ ++ T+ E
Sbjct: 159 SKTSNIGTVTYE 170
>UniRef50_Q77K64 Cluster: Cg30 protein; n=3;
Nucleopolyhedrovirus|Rep: Cg30 protein - Helicoverpa
armigera NPV
Length = 283
Score = 63.3 bits (147), Expect = 6e-09
Identities = 43/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
M + + C +C A I N Q L ++P++ L +C H LC+MC CP
Sbjct: 1 MNSITVNCCVCLGRATIYNNDQQ---ELLVLPLIVLQSCLHALCTMCLKRMRKSLIVKCP 57
Query: 433 LCRVESLHFNVYSINRNVVDV-----------IKCSVTSVAQWNKINDNFDAASLASVLF 579
LCR ++ ++ Y I+ N V+V +KC S+ N D SLA ++
Sbjct: 58 LCRSINIKYSYYCISGNTVNVVSTMSSTDIEEVKCPNISLTSANDTVQTIDIVSLAKDIY 117
Query: 580 EKSLL-DDAEDSNNAANSDDTMLSESQAILKKAADRHCRTKRSSTLKRQLDL 732
+ S+ +D+ + N + D+++++ +++ ++ T S L +Q L
Sbjct: 118 KSSVTSEDSGVTTNDNTAYDSIIADQNKHIEELIEK--TTTLQSLLDKQTKL 167
>UniRef50_A0EYX0 Cluster: Cg30; n=1; Ecotropis obliqua NPV|Rep: Cg30
- Ecotropis obliqua NPV
Length = 269
Score = 62.5 bits (145), Expect = 1e-08
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 1/120 (0%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTII-PVLELDTCKHQLCSMCXXXXXXXXXXPC 429
M V L CNIC+S+ +I++ + I P+ L C H LC C C
Sbjct: 1 MTSVTLNCNICYSLTKIESVPSSNTKNVMYIYPLTVLSMCLHTLCFTCVSKLAKGKELKC 60
Query: 430 PLCRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAED 609
P CR + V+++NR + V A N+ N + D A +LFE S++D+ ++
Sbjct: 61 PFCRTINTKVRVHAVNRCEITSFHVGVNVFATRNE-NIDIDCVEFAKILFECSVVDENDE 119
>UniRef50_Q287I5 Cluster: CG30; n=1; Agrotis segetum
nucleopolyhedrovirus|Rep: CG30 - Agrotis segetum nuclear
polyhedrosis virus (AsNPV)
Length = 453
Score = 60.5 bits (140), Expect = 4e-08
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 10/169 (5%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 426
ME V L C +C + +K + L I+P L L C H LC C
Sbjct: 8 MESVTLNCGVCLTDVLVKANETTRKENLYIVPFLSLIECNHALCVHCVKNLQTSNRRAIS 67
Query: 427 CPLCRVESLHFNVYSINRNVVDVIKCSVTSVAQW--NKINDNFDAASLASVLFEKSLL-- 594
CP+CR S F + SIN N + I C+ S+ + + N N + L S LF SL
Sbjct: 68 CPMCREVSTKFRLISINNNELYTIDCTANSIQRHTSTQCNINMNIPMLVSHLFPFSLRPN 127
Query: 595 DDAE----DSNNAANSDDTMLSESQAILKKAADRHCRTKRSSTLKRQLD 729
DD + + + N T S S A++ + + + T +D
Sbjct: 128 DDVDFITFEPSPNTNEASTSASVSTVYEDTASELYPNNELNQTASASID 176
>UniRef50_Q9J861 Cluster: ORF76 cg30; n=1; Spodoptera exigua
MNPV|Rep: ORF76 cg30 - Spodoptera exigua MNPV
Length = 461
Score = 52.8 bits (121), Expect = 9e-06
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC--XXXXXXXXXXP 426
ME + L C++C S EIK F ++ ++P+ LD CKH LC MC
Sbjct: 1 MESITLGCSVCMSEVEIKAGFGDVDPQMFVVPLFILDECKHVLCLMCCKSIQDGRRRAIT 60
Query: 427 CPLCRVES 450
CP CRV S
Sbjct: 61 CPTCRVSS 68
>UniRef50_P35840 Cluster: Major capsid protein; n=12;
Nucleopolyhedrovirus|Rep: Major capsid protein -
Lymantria dispar multicapsid nuclear polyhedrosis virus
(LdMNPV)
Length = 356
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 5 NVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNF 127
NVLKF+G+ L ++LS YE YP VPL LG Q +N+ + +
Sbjct: 260 NVLKFKGNANALQKSLSRYEPYPIVVPLMLGTQTLNTSSAY 300
>UniRef50_Q9DWZ8 Cluster: VP39; n=2; Nucleopolyhedrovirus|Rep: VP39
- Spodoptera litura multicapsid nucleopolyhedrovirus
(SpltMNPV)
Length = 302
Score = 40.3 bits (90), Expect = 0.049
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +2
Query: 2 RNVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIIN 112
RNV++F G++ L++ L+ YE YP V LFLG Q IN
Sbjct: 255 RNVIQFIGNSDALNKKLARYECYPLVVQLFLGSQTIN 291
>UniRef50_A5IZX6 Cluster: Cg30-2; n=1; Spodoptera litura
granulovirus|Rep: Cg30-2 - Spodoptera litura
granulovirus
Length = 360
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 259 FVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLC 438
F L+C +C + E F+ + + +IP+L + C H LC+ C CP C
Sbjct: 4 FTILKCPVCLNKCEAD--FVSE-NTVKLIPMLTIAECNHHLCAACLYSIANNYEITCPTC 60
Query: 439 R 441
R
Sbjct: 61 R 61
>UniRef50_Q0N423 Cluster: VP39; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: VP39 - Clanis bilineata
nucleopolyhedrosis virus
Length = 350
Score = 37.5 bits (83), Expect = 0.34
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +2
Query: 5 NVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQI 106
NVLKF G+ L + L+ Y+ Y VPL LG QI
Sbjct: 261 NVLKFRGNANALQKNLNRYDPYSLEVPLMLGTQI 294
>UniRef50_A1YJ68 Cluster: Cg30; n=1; Spodoptera frugiperda MNPV|Rep:
Cg30 - Spodoptera frugiperda nuclear polyhedrosis virus
(SfNPV)
Length = 458
Score = 37.5 bits (83), Expect = 0.34
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
M+ V +QC +C I + ++ + ++P L+L+ C H +C C CP
Sbjct: 1 MDLVTIQCIVCLVETTIDH---TKVEEVFVVPFLKLNNCNHVMCVDC--IKNMTTPLSCP 55
Query: 433 LCRVESL 453
+CR S+
Sbjct: 56 VCRRVSI 62
>UniRef50_Q8QLD4 Cluster: CG30; n=3; Nucleopolyhedrovirus|Rep: CG30
- Mamestra configurata NPV-A
Length = 279
Score = 36.7 bits (81), Expect = 0.60
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMC 393
M+ V +QCNIC +K D + I+P+L L C H C C
Sbjct: 1 MKSVTIQCNICLEQVVVKK--PDDEDFMYIVPLLTLTACNHHYCVEC 45
>UniRef50_A0BC91 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 222
Score = 35.9 bits (79), Expect = 1.0
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 349 VLELDTCKHQLCSMCXXXXXXXXXXPCPLCRVE 447
V E+D CKHQ+C C CP CR +
Sbjct: 87 VCEIDVCKHQICLTCIKEWAEKYKTQCPYCRAK 119
>UniRef50_Q8QLD5 Cluster: Vp39 capsid; n=1; Mamestra configurata
NPV-A|Rep: Vp39 capsid - Mamestra configurata NPV-A
Length = 325
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = +2
Query: 8 VLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQIINSENNFLRNDFISRANPNAT 169
V +F+G+ L LS YE YP VPL +G +++ + + + + + NP T
Sbjct: 259 VPRFQGNAVALQTNLSRYEHYPLVVPLMVGNEVLITRDTYKKPPY---PNPTLT 309
>UniRef50_Q80LM9 Cluster: Major capsid protein VP39; n=1; Adoxophyes
honmai NPV|Rep: Major capsid protein VP39 - Adoxophyes
honmai nucleopolyhedrovirus
Length = 312
Score = 35.1 bits (77), Expect = 1.8
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2
Query: 5 NVLKFEGDTRELDRTLSGYEEYPTYVPLFLGYQII 109
NVLKF+G+ L +L Y++Y VPL LG I
Sbjct: 261 NVLKFQGNANALQLSLGKYDQYRIEVPLILGKDTI 295
>UniRef50_Q95XU0 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 374
Score = 35.1 bits (77), Expect = 1.8
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
M KL +CF ++ +P D ++PV L C H +C +C CP
Sbjct: 1 MNLEKLSELLCFQCGKLYESITKPDDEAILVPV--LGACLHSICILC--ATGLESPNSCP 56
Query: 433 LCRVESLHFNVYS 471
+C N+ S
Sbjct: 57 ICENPEAFGNIIS 69
>UniRef50_UPI00006CD331 Cluster: hypothetical protein TTHERM_00275830;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00275830 - Tetrahymena thermophila SB210
Length = 1464
Score = 34.7 bits (76), Expect = 2.4
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +1
Query: 493 VIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKK 672
+I CS S+ + +K + N+DA + S E++LL+ +E N+ N +T ++ + L K
Sbjct: 1273 LIACSKQSIQEISKKSQNYDAQNNQSYNIEETLLESSEIQNDQIN--ETFMNHFEQSLFK 1330
Query: 673 AADRHCRTKRSSTLKRQ 723
+ K++S K Q
Sbjct: 1331 SIKIQNINKQNSQNKHQ 1347
>UniRef50_Q21641 Cluster: Putative uncharacterized protein R02E12.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein R02E12.4 - Caenorhabditis elegans
Length = 639
Score = 34.3 bits (75), Expect = 3.2
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
+EF +QC+ICF V N+ +P+ L TCKH +C+ C CP
Sbjct: 19 LEFEDVQCHICFQV----NH--EPVTFL---------TCKHSICAGCAGRWLSSCSV-CP 62
Query: 433 LC--RVESLHFN 462
+C RV +H N
Sbjct: 63 MCRTRVREIHLN 74
>UniRef50_O16616 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 292
Score = 34.3 bits (75), Expect = 3.2
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 367 CKHQLCSMCXXXXXXXXXXPCPLCR--VESLHFNVYSINRN--VVDVIKCSVTSVAQWNK 534
C H LC C CP CR E +N+ S+++N ++ +IK VT + K
Sbjct: 28 CSHTLCEGCIKKLLKNGRVVCPFCREPTEVPVYNIKSLHKNFSLIQMIKI-VTKTTEVEK 86
Query: 535 INDNF 549
DNF
Sbjct: 87 NWDNF 91
>UniRef50_A5DYZ5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 948
Score = 34.3 bits (75), Expect = 3.2
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 595 DDAEDSNNAANSDDTMLSESQAILKKAADRHCRTKRSSTLKRQLD 729
DD +D+++ N+DD A+ K D+ +K S LKR D
Sbjct: 538 DDNDDNDDKNNNDDNDNDNDNAVKKSTEDKEINSKESVNLKRHFD 582
>UniRef50_UPI0000D557CB Cluster: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1; n=1; Tribolium castaneum|Rep: PREDICTED: similar to
ubiquitin-like, containing PHD and RING finger domains,
1 - Tribolium castaneum
Length = 715
Score = 33.9 bits (74), Expect = 4.2
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 367 CKHQLCSMCXXXXXXXXXXPCPLCRVESLHFNVYSINRNVVDVIK 501
CKH +C C CP CR E V ++N N+ +V++
Sbjct: 661 CKHNVCKGCLKRSFAAEIYVCPCCRFELGETYVMTVNDNLGEVLR 705
>UniRef50_A5KNN5 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC
27756
Length = 842
Score = 33.9 bits (74), Expect = 4.2
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 469 SINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLS 648
S+N ++ ++ + ++A + ++ +NF+AA+ S A +AA+S + LS
Sbjct: 189 SVNSDITKTLEKADANIAAYKQLLENFNAAAEKSAPLITRAKSTASSLKSAASSGSSALS 248
Query: 649 ESQAILKK 672
ES IL +
Sbjct: 249 ESSRILSE 256
>UniRef50_A2EN30 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 990
Score = 33.5 bits (73), Expect = 5.6
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 508 VTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILKK 672
V S++Q + + N A S+ S+ E+ ++D ED N + +D +S + ILKK
Sbjct: 924 VVSISQCSNVGYNSQAVSI-SIKGEEEEINDEEDGNAEESEEDIDISNIEEILKK 977
>UniRef50_Q57252 Cluster: Uncharacterized protein HI1163; n=120;
Proteobacteria|Rep: Uncharacterized protein HI1163 -
Haemophilus influenzae
Length = 1027
Score = 33.5 bits (73), Expect = 5.6
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Frame = +1
Query: 559 SLASVLFEKSLLD-DAEDSNNAANSDDTM-LSESQAILKKAADRHCRTKRSSTLKRQLDL 732
+L +VL +LD A +S + + D + LSES L + +HC+ KR++ +K L
Sbjct: 179 ALRAVLINGEILDTSAVNSVDVLENIDALELSESSKKLHQTIAQHCKEKRAAIIKDLPQL 238
Query: 733 NKF 741
N+F
Sbjct: 239 NRF 241
>UniRef50_Q20323 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 712
Score = 33.1 bits (72), Expect = 7.4
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Frame = +1
Query: 253 MEFVKLQCNICFSVAEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCP 432
+ FV L C+ C S+ + +F R + +C H LCS C CP
Sbjct: 22 LHFVSLVCSGCDSLGDRDRFFDNDKKRPCV------SSCNHSLCSQC-----FDKFTECP 70
Query: 433 LCRVESLHFNVYSINRNVVDVIKCSVTSVAQ--WNKINDNFDAAS 561
+C+ + Y R +V+ K + T + + WN + + S
Sbjct: 71 ICKEPLVRSENYQA-RKIVEHFKENPTMIIEKWWNSTANGSETCS 114
>UniRef50_Q5I3L9 Cluster: Aec44; n=1; Escherichia coli|Rep: Aec44 -
Escherichia coli
Length = 420
Score = 32.7 bits (71), Expect = 9.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 526 WNKINDNFDAASLASVLFEKSLLDDAEDSNNAANSDDTMLSESQAILK 669
WN I N + SL + + +DD SNN NS L+ QA L+
Sbjct: 133 WNSIGRNMEVGSLHGNIGSQIEIDDVRWSNNKKNSGKFKLATIQAFLR 180
>UniRef50_A6LT35 Cluster: Putative uncharacterized protein; n=1;
Clostridium beijerinckii NCIMB 8052|Rep: Putative
uncharacterized protein - Clostridium beijerinckii NCIMB
8052
Length = 307
Score = 32.7 bits (71), Expect = 9.7
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 454 HFNV-YSINRNVVDVIKCSVTSVAQWNKINDNFDAASLAS-VLFEKSLLDDAEDSNNAAN 627
+FN+ YS N N+ ++ C + Q I+ + +SL S +L +LD ++D+ N +
Sbjct: 139 NFNLLYSSNNNIFGILDCKNSKTPQCYSISSSEGLSSLNSFMLINNDILDTSKDNTNLPS 198
Query: 628 SD 633
D
Sbjct: 199 LD 200
>UniRef50_Q54MP5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 146
Score = 32.7 bits (71), Expect = 9.7
Identities = 13/61 (21%), Positives = 41/61 (67%)
Frame = +1
Query: 436 CRVESLHFNVYSINRNVVDVIKCSVTSVAQWNKINDNFDAASLASVLFEKSLLDDAEDSN 615
C+V++ ++N + ++ ++ +C+V S + N I++N+D +++ +K+++++ +DS+
Sbjct: 69 CKVDTTNYNEQQQSGDIHNLYQCTVLSDSYENSISENYD-----TIIDKKTIINNDDDSS 123
Query: 616 N 618
+
Sbjct: 124 S 124
>UniRef50_Q1L721 Cluster: E3 ubiquitin-protein ligase RNF138; n=4;
Xenopus|Rep: E3 ubiquitin-protein ligase RNF138 -
Xenopus laevis (African clawed frog)
Length = 222
Score = 32.7 bits (71), Expect = 9.7
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 295 AEIKNYFMQPIDRLTIIPVLELDTCKHQLCSMCXXXXXXXXXXPCPLCR 441
+EI F+ P+ + + + TC+H C C CPLCR
Sbjct: 9 SEITEEFLCPVCQEILQTPVRTQTCRHVFCRKCFMLAMKSGGAYCPLCR 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,625,569
Number of Sequences: 1657284
Number of extensions: 10292032
Number of successful extensions: 29156
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 28128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29125
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -