Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6c09
(703 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in IAP2... 124 3e-27
UniRef50_Q82484 Cluster: Very late expression factor 1; n=31; Nu... 82 1e-14
UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in IAP... 68 2e-10
UniRef50_Q6QXL7 Cluster: ORF97; n=10; Granulovirus|Rep: ORF97 - ... 52 2e-05
UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16; Nucleopolyhedro... 48 2e-04
UniRef50_Q6JPC6 Cluster: Very late factor-1; n=3; Nucleopolyhedr... 42 0.011
UniRef50_Q6M017 Cluster: Phage integrase; n=4; Methanococcus|Rep... 37 0.42
UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -... 37 0.55
UniRef50_Q6TFH6 Cluster: Putative site-specific recombinase; n=1... 37 0.55
UniRef50_A6F6W3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.55
UniRef50_Q2LUZ2 Cluster: Integrase; n=1; Syntrophus aciditrophic... 36 1.3
UniRef50_A5I4D7 Cluster: Phage integrase; n=1; Clostridium botul... 36 1.3
UniRef50_A1BYV7 Cluster: Phage integrase family protein; n=5; Ba... 35 2.2
UniRef50_A0UXA5 Cluster: Phage integrase; n=1; Clostridium cellu... 35 2.2
UniRef50_A7AG98 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q30Q36 Cluster: Phage integrase; n=1; Thiomicrospira de... 34 3.9
UniRef50_A4ADH6 Cluster: Phage integrase family protein; n=1; Co... 34 3.9
UniRef50_Q9EX39 Cluster: Integrase; n=2; Streptomyces coelicolor... 33 5.1
UniRef50_Q81WA7 Cluster: Prophage LambdaBa02, site-specific reco... 33 5.1
UniRef50_A6D7I2 Cluster: Site-specific recombinase XerD-like pro... 33 5.1
UniRef50_A5VK85 Cluster: Phage integrase family protein; n=2; La... 33 5.1
UniRef50_A5CFM6 Cluster: Tyrosine recombinase XerC; n=1; Orienti... 33 5.1
UniRef50_Q7ZAM5 Cluster: Tyrosine recombinase xerC; n=32; Bacill... 33 5.1
UniRef50_Q8A4X8 Cluster: Integrase; n=1; Bacteroides thetaiotaom... 33 6.8
UniRef50_Q8A3G4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_A1UDK0 Cluster: Phage integrase family protein; n=6; Ac... 33 6.8
UniRef50_A1SBX6 Cluster: Phage integrase family protein; n=4; Ac... 33 6.8
UniRef50_A6GYU9 Cluster: Tyrosine recombinase XerC; n=8; Bactero... 33 9.0
UniRef50_A1TQR1 Cluster: Phage integrase family protein; n=2; Co... 33 9.0
>UniRef50_Q06690 Cluster: Uncharacterized 9.4 kDa protein in
IAP2-VLF1 intergenic region; n=12;
Nucleopolyhedrovirus|Rep: Uncharacterized 9.4 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 84
Score = 124 bits (298), Expect = 3e-27
Identities = 67/85 (78%), Positives = 67/85 (78%)
Frame = +2
Query: 266 MNLYLLLGALTIFSLVYDKKENSXXXXXXXXXXXXXXXXSPAIISKNTESNVEDIPSHKA 445
MNLYLLLGAL IFSLVYDKKENS SPAIISKNTES VEDIPSHKA
Sbjct: 1 MNLYLLLGALAIFSLVYDKKENSIFLYLLILFLVFIIV-SPAIISKNTESTVEDIPSHKA 59
Query: 446 KSVRKKLEIEQALDAILNKNTSSID 520
KSVRKKLEIEQALDAILNKNTSSID
Sbjct: 60 KSVRKKLEIEQALDAILNKNTSSID 84
>UniRef50_Q82484 Cluster: Very late expression factor 1; n=31;
Nucleopolyhedrovirus|Rep: Very late expression factor 1
- Heliothis zea nuclear polyhedrosis virus (HzSNPV)
(Helicoverpa zeasingle nucleocapsid nuclear polyhedrosis
virus)
Length = 415
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/41 (82%), Positives = 41/41 (100%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKYNIGL 139
RHYLSSNLYN+G+PLQKVA+LMNHESSAST+HYLNKY++G+
Sbjct: 307 RHYLSSNLYNNGMPLQKVARLMNHESSASTRHYLNKYDVGV 347
>UniRef50_Q06669 Cluster: Uncharacterized 15.5 kDa protein in
IAP2-VLF1 intergenic region; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 15.5 kDa
protein in IAP2-VLF1 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 133
Score = 68.1 bits (159), Expect = 2e-10
Identities = 32/53 (60%), Positives = 34/53 (64%)
Frame = +2
Query: 542 MSNLMKNFFTEXXXXXXXXXXXXXXXXXXXDWLCEQVYPDKDFSLKLKRVINM 700
MSNLMKNFFTE +WLCEQVYPDKDFSLKLKRV+NM
Sbjct: 1 MSNLMKNFFTELVKSTTFTTKVSVVKTTLSNWLCEQVYPDKDFSLKLKRVVNM 53
>UniRef50_Q6QXL7 Cluster: ORF97; n=10; Granulovirus|Rep: ORF97 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 382
Score = 51.6 bits (118), Expect = 2e-05
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKYNIG 136
R+Y++ + NSG+ L K +KLMNH S +TKHY+NK++ G
Sbjct: 318 RNYVADTILNSGLSLNKTSKLMNHRSVTATKHYINKFHPG 357
>UniRef50_Q9YMP2 Cluster: LdOrf-85 peptide; n=16;
Nucleopolyhedrovirus|Rep: LdOrf-85 peptide - Lymantria
dispar multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 86
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +2
Query: 401 KNTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 520
K S+ D+ + KAKS++KK ++E+A DAILNKNTSS D
Sbjct: 47 KPESSDAADLQTGKAKSIKKKRDLERAFDAILNKNTSSTD 86
>UniRef50_Q6JPC6 Cluster: Very late factor-1; n=3;
Nucleopolyhedrovirus|Rep: Very late factor-1 -
Neodiprion lecontii NPV
Length = 354
Score = 42.3 bits (95), Expect = 0.011
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLN-KYNIG 136
RH L+S ++N VPL +++ MNH + ST+ Y+N KY+ G
Sbjct: 306 RHMLASQMFNEAVPLTTISEYMNHNAVNSTRSYINRKYHRG 346
>UniRef50_Q6M017 Cluster: Phage integrase; n=4; Methanococcus|Rep:
Phage integrase - Methanococcus maripaludis
Length = 182
Score = 37.1 bits (82), Expect = 0.42
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 35 NLYNSGVPLQKVAKLMNHESSASTKHYL 118
+L N GVPL+KV+K + H+S +T HYL
Sbjct: 135 HLLNDGVPLEKVSKYLRHKSINTTMHYL 162
>UniRef50_Q9PYS0 Cluster: ORF125; n=9; Granulovirus|Rep: ORF125 -
Xestia c-nigrum granulosis virus (XnGV) (Xestia
c-nigrumgranulovirus)
Length = 85
Score = 36.7 bits (81), Expect = 0.55
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2
Query: 404 NTESNVEDIPSHKAKSVRKKLEIEQALDAILNKNTSSID 520
NT+S D+ + + K +KK DAILNKN SS++
Sbjct: 47 NTDSAPHDLYNEETKKAKKKKHFNDMFDAILNKNNSSLE 85
>UniRef50_Q6TFH6 Cluster: Putative site-specific recombinase; n=1;
Caedibacter taeniospiralis|Rep: Putative site-specific
recombinase - Caedibacter taeniospiralis
Length = 282
Score = 36.7 bits (81), Expect = 0.55
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH NL N+GV L+KVA L HE+ +TK Y
Sbjct: 239 RHTFCKNLVNAGVSLEKVAVLAGHETLETTKIY 271
>UniRef50_A6F6W3 Cluster: Putative uncharacterized protein; n=1;
Moritella sp. PE36|Rep: Putative uncharacterized protein
- Moritella sp. PE36
Length = 401
Score = 36.7 bits (81), Expect = 0.55
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH ++SNL ++GV + V KL+NH+ +ST Y
Sbjct: 347 RHSVASNLISNGVDISSVQKLLNHKDISSTLRY 379
>UniRef50_Q2LUZ2 Cluster: Integrase; n=1; Syntrophus aciditrophicus
SB|Rep: Integrase - Syntrophus aciditrophicus (strain
SB)
Length = 334
Score = 35.5 bits (78), Expect = 1.3
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYL 118
RHY +S L NSGVP+ + L+ H+ +T YL
Sbjct: 268 RHYGASRLANSGVPITDIQALLGHQRPTTTDIYL 301
>UniRef50_A5I4D7 Cluster: Phage integrase; n=1; Clostridium
botulinum A str. ATCC 3502|Rep: Phage integrase -
Clostridium botulinum A str. ATCC 3502
Length = 331
Score = 35.5 bits (78), Expect = 1.3
Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY--LNKYNI 133
RH ++N N+G+P+ + LM HES A+T+ Y L++ NI
Sbjct: 283 RHSFATNKLNAGMPMPVIQHLMGHESPATTQIYAELSEENI 323
>UniRef50_A1BYV7 Cluster: Phage integrase family protein; n=5;
Bacillus cereus group|Rep: Phage integrase family
protein - Bacillus cereus
Length = 319
Score = 34.7 bits (76), Expect = 2.2
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNK 124
RH+ +++L GV L+K+ + HES +T+ YL +
Sbjct: 267 RHFFANHLMGKGVELKKIRDYLGHESIMTTERYLRE 302
>UniRef50_A0UXA5 Cluster: Phage integrase; n=1; Clostridium
cellulolyticum H10|Rep: Phage integrase - Clostridium
cellulolyticum H10
Length = 517
Score = 34.7 bits (76), Expect = 2.2
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH+ + + G+P+Q ++K++NH+S T+ Y
Sbjct: 338 RHFFAQGAWKGGMPVQFISKMLNHDSLVMTETY 370
>UniRef50_A7AG98 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 310
Score = 34.3 bits (75), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH + +G+P++ +AK+M H S AST+ Y
Sbjct: 262 RHSFGTLTLEAGIPIESIAKMMGHSSIASTQIY 294
>UniRef50_Q30Q36 Cluster: Phage integrase; n=1; Thiomicrospira
denitrificans ATCC 33889|Rep: Phage integrase -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 150
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNK 124
RH L L N+ VPL+ ++K + H +T+ Y N+
Sbjct: 97 RHLLGFTLVNNNVPLEYISKALGHSKITTTQRYSNQ 132
>UniRef50_A4ADH6 Cluster: Phage integrase family protein; n=1;
Congregibacter litoralis KT71|Rep: Phage integrase
family protein - Congregibacter litoralis KT71
Length = 186
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 38 LYNSGVPLQKVAKLMNHESSASTKHYL 118
+Y+ GVP++ V+K++NH S A T YL
Sbjct: 144 MYSDGVPVEMVSKVLNHSSPAVTMTYL 170
>UniRef50_Q9EX39 Cluster: Integrase; n=2; Streptomyces
coelicolor|Rep: Integrase - Streptomyces coelicolor
Length = 370
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSAST 106
RHY +SN +G+P+ VA+ M H+S T
Sbjct: 314 RHYFASNALGNGIPITDVAEWMGHKSIEET 343
>UniRef50_Q81WA7 Cluster: Prophage LambdaBa02, site-specific
recombinase, phage integrase family; n=1; Bacillus
anthracis|Rep: Prophage LambdaBa02, site-specific
recombinase, phage integrase family - Bacillus anthracis
Length = 325
Score = 33.5 bits (73), Expect = 5.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYL 118
RH NL GVPL+K+ L NH ++T+ YL
Sbjct: 268 RHSRLDNLKVQGVPLEKLKSLANHSDISTTQSYL 301
>UniRef50_A6D7I2 Cluster: Site-specific recombinase XerD-like
protein; n=1; Vibrio shilonii AK1|Rep: Site-specific
recombinase XerD-like protein - Vibrio shilonii AK1
Length = 413
Score = 33.5 bits (73), Expect = 5.1
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKYNIG 136
RH + S L + GV L +AK +NH +ST+ Y +K +G
Sbjct: 353 RHTVGSLLASQGVSLHDIAKQLNHADLSSTRRY-SKLTVG 391
>UniRef50_A5VK85 Cluster: Phage integrase family protein; n=2;
Lactobacillus reuteri|Rep: Phage integrase family
protein - Lactobacillus reuteri F275
Length = 215
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYL 118
R LY GV ++ +++L NH S +T+HYL
Sbjct: 165 RKTFGRQLYKKGVNVEIISQLFNHSSERNTRHYL 198
>UniRef50_A5CFM6 Cluster: Tyrosine recombinase XerC; n=1; Orientia
tsutsugamushi Boryong|Rep: Tyrosine recombinase XerC -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 312
Score = 33.5 bits (73), Expect = 5.1
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH +S+L N+G L+ + +L+ H+S +ST+ Y
Sbjct: 254 RHCFASHLLNNGADLRSIQELLGHQSLSSTQIY 286
>UniRef50_Q7ZAM5 Cluster: Tyrosine recombinase xerC; n=32;
Bacillales|Rep: Tyrosine recombinase xerC -
Oceanobacillus iheyensis
Length = 305
Score = 33.5 bits (73), Expect = 5.1
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH +++L N G L+ V +L+ HES +ST+ Y
Sbjct: 249 RHTFATHLLNEGADLRSVQELLGHESLSSTQIY 281
>UniRef50_Q8A4X8 Cluster: Integrase; n=1; Bacteroides
thetaiotaomicron|Rep: Integrase - Bacteroides
thetaiotaomicron
Length = 86
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH + + +SG+P++ +AK+M H + ST+ Y
Sbjct: 53 RHSFGTLMLSSGIPIESIAKMMGHTNINSTQVY 85
>UniRef50_Q8A3G4 Cluster: Putative uncharacterized protein; n=1;
Bacteroides thetaiotaomicron|Rep: Putative
uncharacterized protein - Bacteroides thetaiotaomicron
Length = 488
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/43 (34%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESS--ASTKHYLNKYNIGL 139
RH ++NL+N+GV + +++ M H SS A T+ Y+ Y + +
Sbjct: 409 RHSFATNLHNAGVDMDYISESMGHASSDHAITQIYIEHYPLDI 451
>UniRef50_A1UDK0 Cluster: Phage integrase family protein; n=6;
Actinomycetales|Rep: Phage integrase family protein -
Mycobacterium sp. (strain KMS)
Length = 737
Score = 33.1 bits (72), Expect = 6.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHY 115
RH L + L N VP + V ++++H+S T HY
Sbjct: 571 RHTLGTRLINRDVPQEVVRRILDHDSPQMTAHY 603
>UniRef50_A1SBX6 Cluster: Phage integrase family protein; n=4;
Actinomycetales|Rep: Phage integrase family protein -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 375
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLN 121
RHY +S+LY G+ L+ + +L+ H ++T Y++
Sbjct: 302 RHYCASHLYEQGMTLKAIQELLGHGWLSTTTQYIH 336
>UniRef50_A6GYU9 Cluster: Tyrosine recombinase XerC; n=8;
Bacteroidetes|Rep: Tyrosine recombinase XerC -
Flavobacterium psychrophilum (strain JIP02/86 / ATCC
49511)
Length = 298
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLN 121
RH ++++ N G L + +L+ H S AST+ Y N
Sbjct: 245 RHTFATHMLNHGADLNSIKELLGHSSLASTQVYTN 279
>UniRef50_A1TQR1 Cluster: Phage integrase family protein; n=2;
Comamonadaceae|Rep: Phage integrase family protein -
Acidovorax avenae subsp. citrulli (strain AAC00-1)
Length = 352
Score = 32.7 bits (71), Expect = 9.0
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 17 RHYLSSNLYNSGVPLQKVAKLMNHESSASTKHYLNKY 127
RH +S+LY PL+ + L+ HE A+T Y++++
Sbjct: 278 RHAFASHLYQHKAPLKTIQLLLGHEHLATTTIYVSRH 314
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,609,628
Number of Sequences: 1657284
Number of extensions: 9598024
Number of successful extensions: 23434
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 22790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23429
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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