Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6c05
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    31   0.016
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   1.9  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    22   7.5  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            22   7.5  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    22   7.5  

>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 30.7 bits (66), Expect = 0.016
 Identities = 18/75 (24%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
 Frame = -3

Query: 231 MNNHPNFIKIYFNHGFINNQVIVMDYIDCPDLFETLQ--IKGELSHQLVS-NIIRQLCEA 61
           M  HP+ +++   +       +V D       FE ++  + G +  + V+ + +RQ+ EA
Sbjct: 48  MLKHPHIVELLETYSSEGMLYMVFDMEGSDICFEVVRRAVAGFVYSEAVACHYLRQILEA 107

Query: 60  LNDLHKHNFIHNDIK 16
           L   H+++ IH D++
Sbjct: 108 LRYCHENDIIHRDVR 122


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -3

Query: 108 LSHQLVSNIIRQLCEALNDLHKHNFIHNDIKLENV 4
           L+H L S +     E      K +  H DIK +N+
Sbjct: 359 LAHSLASGVAHLHTEIFGTPGKPSIAHRDIKSKNI 393


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 317 RTSPLANCICRKQFRR 270
           +TS L  C+C+K F R
Sbjct: 51  QTSCLPGCVCKKGFVR 66


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 144 PDLFETLQIKGELSHQLVSNIIRQLCEA 61
           P+L   L +  E   Q +  I +Q CEA
Sbjct: 343 PELLHNLNLMVEYCEQDIITIDKQKCEA 370


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +1

Query: 241 DFYFVDVKIVRRNCFLQIQFASGLVR*NRYFAQKK 345
           D YF++ K+V R+  + +  ++G    N Y+  K+
Sbjct: 107 DQYFLNKKVVPRSEVVNLLESAGFSNSNPYYIVKQ 141


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 308,903
Number of Sequences: 2352
Number of extensions: 5583
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)