Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b23
         (612 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   3.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.2  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 198 FIFFCNIEGKLFVIFSACKLL 136
           ++FF   E  L++IFS C ++
Sbjct: 145 YVFFVENEPILYLIFSYCPIV 165


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
 Frame = -2

Query: 305 NQFYRNLSPFFLETLICNAPLIVNVTIRIVIP*YTSSFSFVILKVNYL---------LFS 153
           NQ+ + L    L+    ++ ++ NV  +++   YT  F+ ++L V+++         L+S
Sbjct: 84  NQWCKLLENLKLDRENNSSFVVANVLFQLIHVYYTVVFT-LLLGVDFVKEYAFEYIQLYS 142

Query: 152 QLANYYFLNLTLKHLL 105
           Q   Y+ L  TLK LL
Sbjct: 143 QFILYFLLFATLKILL 158


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
 Frame = -2

Query: 305 NQFYRNLSPFFLETLICNAPLIVNVTIRIVIP*YTSSFSFVILKVNYL---------LFS 153
           NQ+ + L    L+    ++ ++ NV  +++   YT  F+ ++L V+++         L+S
Sbjct: 84  NQWCKLLENLKLDRENNSSFVVANVLFQLIHVYYTVVFT-LLLGVDFVKEYAFEYIQLYS 142

Query: 152 QLANYYFLNLTLKHLL 105
           Q   Y+ L  TLK LL
Sbjct: 143 QFILYFLLFATLKILL 158


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
 Frame = -2

Query: 305 NQFYRNLSPFFLETLICNAPLIVNVTIRIVIP*YTSSFSFVILKVNYL---------LFS 153
           NQ+ + L    L+    ++ ++ NV  +++   YT  F+ ++L V+++         L+S
Sbjct: 404 NQWCKLLENLKLDRENNSSFVVANVLFQLIHVYYTVVFT-LLLGVDFVKEYAFEYIQLYS 462

Query: 152 QLANYYFLNLTLKHLL 105
           Q   Y+ L  TLK LL
Sbjct: 463 QFILYFLLFATLKILL 478


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +1

Query: 217 TILIVTFTISGALHISVSKK 276
           T+LIVT  +   +HIS S++
Sbjct: 11  TVLIVTLLVVLLVHISSSER 30


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,964
Number of Sequences: 336
Number of extensions: 3135
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)