Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6b23
(612 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 144 5e-35
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 144 6e-35
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 142 2e-34
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 141 5e-34
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 140 8e-34
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 140 1e-33
03_01_0034 + 318432-318825,318902-319851 138 4e-33
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 131 5e-31
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 75 3e-14
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 75 6e-14
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 71 6e-13
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 69 3e-12
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 45 5e-05
12_02_0931 + 24512496-24512567,24512705-24512806,24512939-245129... 32 0.41
06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124 31 0.54
12_02_0795 + 23217463-23217684,23218296-23219155,23220001-232209... 31 0.95
03_02_0319 - 7421357-7421757,7421768-7421843,7424695-7424796,742... 30 1.7
07_01_1133 - 10550799-10551137,10552195-10552254,10555693-105574... 29 2.2
11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591 29 2.9
09_04_0516 - 18246439-18246582,18246763-18246899,18247067-182470... 29 3.8
09_01_0175 - 2509014-2509064,2509389-2509490,2509603-2509729,250... 29 3.8
03_05_0615 + 26137785-26138593,26139307-26141368 28 5.1
10_01_0300 - 3257584-3258825 28 6.7
02_05_1219 + 35011571-35011897,35012008-35013780,35013915-350140... 27 8.9
02_02_0216 + 7958881-7959123,7959225-7959422,7959520-7960083 27 8.9
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 144 bits (349), Expect = 5e-35
Identities = 62/77 (80%), Positives = 71/77 (92%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIG+KFWE+I DEHGVD TG Y G+SDLQL+RINVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD+VR
Sbjct: 61 PRAVLMDLEPGTMDSVR 77
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 144 bits (348), Expect = 6e-35
Identities = 61/77 (79%), Positives = 71/77 (92%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIG+KFWE+I DEHG+D TG Y G+SDLQL+RINVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD+VR
Sbjct: 61 PRAVLMDLEPGTMDSVR 77
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 142 bits (344), Expect = 2e-34
Identities = 60/77 (77%), Positives = 71/77 (92%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIG+KFWE+I DEHG+D TG Y G+SDLQL+RINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD+VR
Sbjct: 61 PRAVLMDLEPGTMDSVR 77
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 141 bits (341), Expect = 5e-34
Identities = 59/78 (75%), Positives = 71/78 (91%)
Frame = +2
Query: 377 EMREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKY 556
+MREI+H+Q GQCGNQIGSKFWE++ DEHG+D TG Y G SDLQL+R+NVYYNEAS G++
Sbjct: 180 KMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRF 239
Query: 557 VPRAVLVDLEPGTMDAVR 610
VPRAVL+DLEPGTMD+VR
Sbjct: 240 VPRAVLMDLEPGTMDSVR 257
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 140 bits (339), Expect = 8e-34
Identities = 59/77 (76%), Positives = 70/77 (90%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIGSKFWE++ DEHG+D TG Y G SDLQL+R+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD+VR
Sbjct: 61 PRAVLMDLEPGTMDSVR 77
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 140 bits (338), Expect = 1e-33
Identities = 58/77 (75%), Positives = 70/77 (90%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIG+KFWE++ DEHG+D TG Y G SDLQL+R+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD+VR
Sbjct: 61 PRAVLMDLEPGTMDSVR 77
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 138 bits (333), Expect = 4e-33
Identities = 57/77 (74%), Positives = 70/77 (90%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIG+KFWE++ EHG+D TG Y G+SDLQL+R+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD+VR
Sbjct: 61 PRAVLMDLEPGTMDSVR 77
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 131 bits (316), Expect = 5e-31
Identities = 56/77 (72%), Positives = 67/77 (87%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYV 559
MREI+H+Q GQCGNQIG+KFWE+I EHGVD TG Y G S QL+RINVY+NEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 560 PRAVLVDLEPGTMDAVR 610
PRAVL+DLEPGTMD++R
Sbjct: 61 PRAVLMDLEPGTMDSLR 77
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 75.4 bits (177), Expect = 3e-14
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +2
Query: 383 REIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQLDRINVYYNEASSGKYVP 562
REI+ +Q GQCGNQIG +FW+ + EHG+ G+ + + DR +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 563 RAVLVDLEPGTMDAVR 610
RA+LVDLEP ++ ++
Sbjct: 63 RALLVDLEPRVINGIQ 78
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 74.5 bits (175), Expect = 6e-14
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 553
MREI+ + GQ G Q+G+ WE+ EHG++ G ++ + + D N +++E +GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 554 YVPRAVLVDLEPGTMDAVR 610
+VPRA+ VDLEP +D VR
Sbjct: 61 HVPRAIFVDLEPTVIDEVR 79
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 71.3 bits (167), Expect = 6e-13
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 553
MRE + + GQ G Q+G+ WE+ EHG+ G G+ + D N +++E +GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 554 YVPRAVLVDLEPGTMDAVR 610
+VPRAV VDLEP +D VR
Sbjct: 61 HVPRAVFVDLEPTVIDEVR 79
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/79 (40%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVYKGESDLQL--DRINVYYNEASSGK 553
MRE + + GQ G Q+G+ WE+ EHG+ G + + D N +++E +GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 554 YVPRAVLVDLEPGTMDAVR 610
+VPRAV VDLEP +D VR
Sbjct: 61 HVPRAVFVDLEPTVIDEVR 79
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +2
Query: 512 DRINVYYNEASSGKYVPRAVLVDLEPGTMDAVR 610
D N +++E SSGK+VPRA+ VDLEP +D V+
Sbjct: 107 DAFNTFFSETSSGKHVPRALFVDLEPTVIDEVK 139
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGV 484
MREI+ + GQ G Q+G+ WE+ EHG+ G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGL 35
>12_02_0931 +
24512496-24512567,24512705-24512806,24512939-24512984,
24513292-24513355,24513997-24514348,24514497-24514749,
24515069-24515311,24515399-24515518,24515710-24516158
Length = 566
Score = 31.9 bits (69), Expect = 0.41
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFW----EIISDEHGVDTTGVYKGESDLQLDRINVYYNEASS 547
MRE V VQ G N +GS FW E++ D V+K + L +D + E
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNAA-LDMD-VLYRSGETHQ 58
Query: 548 G--KYVPRAVLVD 580
G Y PR V VD
Sbjct: 59 GVATYCPRLVSVD 71
>06_03_0276 + 19087075-19087910,19089117-19089607,19089737-19091124
Length = 904
Score = 31.5 bits (68), Expect = 0.54
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 224 LSLHLLSVVHYISVFPRKKAISSDKIDYIIGFRIVHLI 337
L HL + + Y+S FP I ++ DYI+G R+ ++
Sbjct: 422 LPYHLRTCLLYLSAFPEDYLIEAENEDYILGCRVHDMV 459
>12_02_0795 +
23217463-23217684,23218296-23219155,23220001-23220929,
23221184-23221968
Length = 931
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +2
Query: 116 LMSN*ENNNLQAEKITNNLPSILQKKMN*CITELR-FLSL-------HLLSVVHYISVFP 271
L++N N + E++ N++ S LQK + + E+R LSL HL + + Y+S+FP
Sbjct: 466 LLANKANTKEEWERVRNSIGSTLQKDPD--VEEMRRILSLSYDDLPQHLKTCLLYLSIFP 523
Query: 272 RKKAISSDKI 301
I D++
Sbjct: 524 EDYEIERDRL 533
>03_02_0319 -
7421357-7421757,7421768-7421843,7424695-7424796,
7424911-7424982
Length = 216
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +2
Query: 380 MREIVHVQAGQCGNQIGSKFW----EIISDEHGVDTTGVYKGESDLQLDRINVYYNEASS 547
MRE V VQ G N +GS FW E++ D V+K ++ LD +Y + +
Sbjct: 1 MREAVTVQVGGFANYVGSHFWNFQDELLGLADDPDADPVFKNDA---LDMDVLYRSGETH 57
Query: 548 GKY 556
KY
Sbjct: 58 QKY 60
>07_01_1133 -
10550799-10551137,10552195-10552254,10555693-10557401,
10557534-10557616,10577533-10578074
Length = 910
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 416 GNQIGSKFWEIISDEHG--VDTTGVYKGESDLQLDRIN 523
G+Q SKFW+ + +E G ++ + Y ++D Q +R+N
Sbjct: 540 GSQFTSKFWQKLQEEMGTHLNFSTAYHPQTDGQTERVN 577
>11_04_0054 - 12895574-12895840,12906985-12908121,12908274-12908591
Length = 573
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +2
Query: 416 GNQIGSKFWEIISDEHG--VDTTGVYKGESDLQLDRIN 523
G+Q SKFW+ + +E G ++ + Y ++D Q +R+N
Sbjct: 331 GSQFTSKFWQKLQEELGTRLNFSTAYHPQTDGQTERVN 368
>09_04_0516 -
18246439-18246582,18246763-18246899,18247067-18247097,
18248097-18248194,18248222-18248291,18248704-18248835,
18249213-18249386
Length = 261
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = -2
Query: 302 QFYRNLSPFFLETLICNAPLIVNV 231
Q++ N + + LICN P+I+NV
Sbjct: 89 QYHHNFKSWAMNALICNNPIILNV 112
>09_01_0175 -
2509014-2509064,2509389-2509490,2509603-2509729,
2509852-2511564,2512335-2512424,2512533-2512801,
2513118-2513687,2513703-2514065
Length = 1094
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 452 SDEHGVDTT-GVYKGESDLQLDRINVYYNEASSGKYVPRAVLVDLEPGTMDAV 607
SD +G T G E++L +D ++ +NE ++ +V R V + GT+ AV
Sbjct: 448 SDMNGSSTVQGEPSDENELIVDDLDAIWNELNTSLHVSRYVTDSVMKGTISAV 500
>03_05_0615 + 26137785-26138593,26139307-26141368
Length = 956
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 224 LSLHLLSVVHYISVFPRKKAISSDKI 301
L HL + + Y+S+FP + I SDK+
Sbjct: 417 LPTHLKACLLYLSIFPEDQVIESDKL 442
>10_01_0300 - 3257584-3258825
Length = 413
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 416 GNQIGSKFWEIISDEHG--VDTTGVYKGESDLQLDRIN 523
G+Q S FW+ + +E G ++ + Y ++D Q +R+N
Sbjct: 121 GSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDRQTERVN 158
>02_05_1219 +
35011571-35011897,35012008-35013780,35013915-35014068,
35014158-35014801
Length = 965
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = -2
Query: 473 CRRHARLRLSPKTSILSD-SRIGRLARGLFHAFLTQYSHTPS 351
CRRH L +SP S LS+ +RI L GL + + +PS
Sbjct: 346 CRRHQSLSVSPTNSTLSEPTRIVVLKPGLVKSQEPKILRSPS 387
>02_02_0216 + 7958881-7959123,7959225-7959422,7959520-7960083
Length = 334
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/66 (25%), Positives = 30/66 (45%)
Frame = +2
Query: 308 IIGFRIVHLIPS*VVKACVNIVLEMREIVHVQAGQCGNQIGSKFWEIISDEHGVDTTGVY 487
I G+ ++ I + V AC +V +I+ + A + N +G WE+ T
Sbjct: 110 IRGYEVIDKIKANVEAACPGVV-SCADILALAAREGVNLLGGPSWEVPLGRRDSTTASKS 168
Query: 488 KGESDL 505
+ +SDL
Sbjct: 169 EADSDL 174
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,079,403
Number of Sequences: 37544
Number of extensions: 335628
Number of successful extensions: 990
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 987
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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