Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6b14
(635 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical pr... 211 3e-55
U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical pr... 175 2e-44
AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondria... 75 4e-14
AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical ... 55 4e-08
Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical ... 52 3e-07
Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical pr... 52 5e-07
AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical ... 49 3e-06
AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical ... 49 3e-06
U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical p... 46 3e-05
U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical p... 39 0.003
AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeri... 31 0.69
AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein, su... 31 0.69
AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alp... 31 0.69
AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s... 31 0.69
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical p... 29 3.7
Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.4
U39742-2|AAM51521.1| 321|Caenorhabditis elegans Hypothetical pr... 28 6.4
U39742-1|AAK39198.1| 322|Caenorhabditis elegans Hypothetical pr... 28 6.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.4
U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical pr... 27 8.5
AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical... 27 8.5
>Z68270-1|CAA92566.2| 458|Caenorhabditis elegans Hypothetical
protein ZC410.2 protein.
Length = 458
Score = 211 bits (516), Expect = 3e-55
Identities = 99/155 (63%), Positives = 122/155 (78%)
Frame = +3
Query: 165 VNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTS 344
V VP T +T L NG R+ATE++G +TAT+G++IDAGSRYE KNNG AHFLEHMAFKGT
Sbjct: 25 VFVPETIVTTLPNGFRVATENTGGSTATIGVFIDAGSRYENEKNNGTAHFLEHMAFKGTP 84
Query: 345 KRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIE 524
+R++ LEL VEN+GAHLNAYTSRE T +YAKC + +V+IL+DI+ NSSLA +IE
Sbjct: 85 RRTRMGLELEVENIGAHLNAYTSRESTTYYAKCFTEKLDQSVDILSDILLNSSLATKDIE 144
Query: 525 RERGVILREMQDVESNLQEVVFDHLHATAFQGTPL 629
ERGVI+REM++V N QEVVFD LHA F+G PL
Sbjct: 145 AERGVIIREMEEVAQNFQEVVFDILHADVFKGNPL 179
>U13644-8|AAB52679.1| 471|Caenorhabditis elegans Hypothetical
protein F56D2.1 protein.
Length = 471
Score = 175 bits (427), Expect = 2e-44
Identities = 84/185 (45%), Positives = 122/185 (65%)
Frame = +3
Query: 75 LKVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVG 254
L++A + + + +QVR ++A + K L + P ++T L NG R+ TED+G+ATATVG
Sbjct: 3 LRLAVSSALRPALNSQVRNASSAVSVKDVLASAPQAEVTTLKNGFRVVTEDNGSATATVG 62
Query: 255 LWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFY 434
+WI+ GSR+E KNNGVAHFLE + KGT KR+ LE + +GA LN++T R+QT +
Sbjct: 63 VWIETGSRFENEKNNGVAHFLERLIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVF 122
Query: 435 AKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAF 614
+ A DV V+ILAD+++NS L I+ ER +L+E++ + Q V+FD LHA F
Sbjct: 123 VQAGAQDVEKVVDILADVLRNSKLEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGF 182
Query: 615 QGTPL 629
QGTPL
Sbjct: 183 QGTPL 187
>AC025726-19|AAK73925.1| 477|Caenorhabditis elegans Mitochondrial
processing peptidasealpha protein 1 protein.
Length = 477
Score = 74.9 bits (176), Expect = 4e-14
Identities = 43/156 (27%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Frame = +3
Query: 180 TKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQT 359
+++T L NGL++ TED+ TVG+ I++G RYE G++ +E +A+ + S
Sbjct: 19 SRVTRLPNGLKVCTEDTYGDFVTVGVAIESGCRYENGFPFGISRIVEKLAYNSSESFSSR 78
Query: 360 D--LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERER 533
D L EN G ++ ++R+ ++ A C + V + +L+D I E +E+ +
Sbjct: 79 DEVFAKLEENSGI-VDCQSTRDTMMYAASCHRDGVDSVIHVLSDTIWKPIFDEQSLEQAK 137
Query: 534 GVILREMQDVESNLQEV---VFDHLHATAFQGTPLG 632
+ E QD+ + ++ + + D +H AFQ +G
Sbjct: 138 LTVSYENQDLPNRIEAIEILLTDWIHQAAFQNNTIG 173
>AF100306-6|AAC68920.1| 427|Caenorhabditis elegans Hypothetical
protein T24C4.1 protein.
Length = 427
Score = 55.2 bits (127), Expect = 4e-08
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Frame = +3
Query: 189 TVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTDLE 368
T L+NGL++ ++++ A + + L AGSRYE G+ H + + F G +S L+
Sbjct: 24 TKLNNGLKVVSQENNGAISQLILAFRAGSRYEKVTQPGLVHHVRN--FVGRDAQSYPGLQ 81
Query: 369 LLVEN--MGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVI 542
L+ + GA+LN++ +R+ + A+ IL + + E+E I
Sbjct: 82 LVWSSAASGANLNSFATRDIFGVQISVARDQAAYALSILGHVAAKPAFKPWELEDVTPTI 141
Query: 543 LREMQDVESNLQEVVFDHLHATAFQGTPL 629
L ++ + +VF+ +H AF+ L
Sbjct: 142 LADLS--QKTPYGIVFEDIHRAAFRNDSL 168
>Z67734-4|CAB54182.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 52.4 bits (120), Expect = 3e-07
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +3
Query: 99 VISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSR 278
++S V +AA K A V K TVL+NGLR+++ + AT+++ L AGSR
Sbjct: 1 MLSRPSGTVAKRFVSAAAKSAGVQ---EKTTVLENGLRVSSVELNGATSSIVLAFRAGSR 57
Query: 279 YETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDV 458
Y+ + G+ H + + + L G +L A ++R+ + +
Sbjct: 58 YQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQS 117
Query: 459 PVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLG 632
V + +L + N++ ++E + L + + F+ LH AF+ LG
Sbjct: 118 AVVLSLLGQ-LGNNAFKPWDVEDVKHDTLPADATYLTG-TTIAFEQLHQAAFRNGGLG 173
>AL032678-1|CAB54320.1| 410|Caenorhabditis elegans Hypothetical
protein VW06B3R.1a protein.
Length = 410
Score = 52.4 bits (120), Expect = 3e-07
Identities = 42/178 (23%), Positives = 77/178 (43%)
Frame = +3
Query: 99 VISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSR 278
++S V +AA K A V K TVL+NGLR+++ + AT+++ L AGSR
Sbjct: 1 MLSRPSGTVAKRFVSAAAKSAGVQ---EKTTVLENGLRVSSVELNGATSSIVLAFRAGSR 57
Query: 279 YETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDV 458
Y+ + G+ H + + + L G +L A ++R+ + +
Sbjct: 58 YQPANKQGLTHLIRNSVGRDAPNFPGLALVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQS 117
Query: 459 PVAVEILADIIQNSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLG 632
V + +L + N++ ++E + L + + F+ LH AF+ LG
Sbjct: 118 AVVLSLLGQ-LGNNAFKPWDVEDVKHDTLPADATYLTG-TTIAFEQLHQAAFRNGGLG 173
>Z72514-2|CAA96675.2| 422|Caenorhabditis elegans Hypothetical
protein T10B10.2 protein.
Length = 422
Score = 52.0 bits (119), Expect = 3e-07
Identities = 40/166 (24%), Positives = 67/166 (40%)
Frame = +3
Query: 135 ATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHF 314
A A+K A P K+ L NGL + T DS A + L AGSRYE + G++H
Sbjct: 8 AVRGAHKAATTK-PVEKVAKLGNGLTVGTIDSHKPIAHLVLAFRAGSRYEKANQAGLSHT 66
Query: 315 LEHMAFKGTSKRSQTDLELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQ 494
+ + + T + + + G L ++TSR+ V + +L +
Sbjct: 67 IRNFVGRDTQEYFGNTVVWTLSQTGGVLKSFTSRDLFGVSLTIPRESTSVGLSVLGQVAG 126
Query: 495 NSSLAEPEIERERGVILREMQDVESNLQEVVFDHLHATAFQGTPLG 632
N E+E + + ++V D +H A++ LG
Sbjct: 127 NPGFKPWEVEDVLPTM--RADNGYRTAYDLVVDQIHKAAYRNGGLG 170
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 114 GNQVRTLATAAAYKQALVNVPPTKLTVLDNG-LRIATEDSGAATATVGLWIDAG 272
GN + LAT A AL N P K G + A +G+A+A + D+G
Sbjct: 261 GNNTKALATQAVLLTALGNSSPVKFNTGTTGVIAKAVGQNGSASAFQAVHADSG 314
>Z67734-5|CAD56227.1| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 51.6 bits (118), Expect = 5e-07
Identities = 35/150 (23%), Positives = 67/150 (44%)
Frame = +3
Query: 183 KLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTD 362
K TVL+NGLR+++ + AT+++ L AGSRY+ + G+ H + + +
Sbjct: 40 KTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLA 99
Query: 363 LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVI 542
L G +L A ++R+ + + V + +L + N++ ++E +
Sbjct: 100 LVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQ-LGNNAFKPWDVEDVKHDT 158
Query: 543 LREMQDVESNLQEVVFDHLHATAFQGTPLG 632
L + + F+ LH AF+ LG
Sbjct: 159 LPADATYLTG-TTIAFEQLHQAAFRNGGLG 187
>AL032678-2|CAC35829.2| 424|Caenorhabditis elegans Hypothetical
protein VW06B3R.1b protein.
Length = 424
Score = 51.6 bits (118), Expect = 5e-07
Identities = 35/150 (23%), Positives = 67/150 (44%)
Frame = +3
Query: 183 KLTVLDNGLRIATEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTD 362
K TVL+NGLR+++ + AT+++ L AGSRY+ + G+ H + + +
Sbjct: 40 KTTVLENGLRVSSVELNGATSSIVLAFRAGSRYQPANKQGLTHLIRNSVGRDAPNFPGLA 99
Query: 363 LELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVI 542
L G +L A ++R+ + + V + +L + N++ ++E +
Sbjct: 100 LVWNTAQNGGNLTAVSNRDVLAIEVNVVRDQSAVVLSLLGQ-LGNNAFKPWDVEDVKHDT 158
Query: 543 LREMQDVESNLQEVVFDHLHATAFQGTPLG 632
L + + F+ LH AF+ LG
Sbjct: 159 LPADATYLTG-TTIAFEQLHQAAFRNGGLG 187
>AF016421-6|AAT92074.1| 984|Caenorhabditis elegans Hypothetical
protein F44E7.4d protein.
Length = 984
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 90 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 149
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 150 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 203
>AF016421-5|AAO12429.1| 1008|Caenorhabditis elegans Hypothetical
protein F44E7.4c protein.
Length = 1008
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 90
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 91 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 144
>AF016421-4|AAC25789.1| 1067|Caenorhabditis elegans Hypothetical
protein F44E7.4a protein.
Length = 1067
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 90 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 149
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 150 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 203
>AF016421-3|AAM45374.1| 1051|Caenorhabditis elegans Hypothetical
protein F44E7.4b protein.
Length = 1051
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L + G + + G+AHF EHM F GT+K S+ +
Sbjct: 90 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYS 149
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ NAYTS + T ++ + +P A++ + E ERE
Sbjct: 150 KFLAAHAGSSNAYTSSDHTNYHFDVKPDQLPGALDRFVQFFLSPQFTESATERE 203
>U23180-3|AAC46729.2| 856|Caenorhabditis elegans Hypothetical
protein C28F5.4 protein.
Length = 856
Score = 48.0 bits (109), Expect = 6e-06
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK--RSQTDL 365
L NGLR+ DS + V L + G + + G+AHF EHM F GT+K +
Sbjct: 32 LTNGLRVLLVSDSKTRVSAVALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPSEREYF 91
Query: 366 ELLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ L N G NAYT + T + + + + A++ A + E ERE
Sbjct: 92 KYLAANNG-DSNAYTDTDHTNYSFEVRSEKLYGALDRFAQFFLDPQFTESATERE 145
>Z99283-7|CAB16537.2| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L ++ G + + G+AHF EHM F GT+K S+ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVNVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYF 90
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ NA T+ + T ++ + + +P A++ + E ERE
Sbjct: 91 KFLTAHAGRANANTATDHTNYFFEVKPDQLPGALDRFVQFFLSPQFTESATERE 144
>Z92782-14|CAI46605.1| 985|Caenorhabditis elegans Hypothetical
protein Y70C5C.1 protein.
Length = 985
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L ++ G + + G+AHF EHM F GT+K S+ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVNVGHLMDPWELPGLAHFCEHMLFLGTAKYPSENEYF 90
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ NA T+ + T ++ + + +P A++ + E ERE
Sbjct: 91 KFLTAHAGRANANTATDHTNYFFEVKPDQLPGALDRFVQFFLSPQFTESATERE 144
>U55372-2|AAA98001.1| 980|Caenorhabditis elegans Hypothetical
protein C02G6.1 protein.
Length = 980
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSK-RSQTDLE 368
L NG+R+ D + L + G + + G+AHF EHM F GT+K ++ +
Sbjct: 31 LTNGIRVLLVSDPTTDKSAAALDVKVGHLMDPWELPGLAHFCEHMLFLGTAKYPTENEYS 90
Query: 369 LLVENMGAHLNAYTSREQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERE 530
+ + H NA T+ + T ++ + + A++ + E ERE
Sbjct: 91 KFLTDNAGHRNAVTASDHTNYHFDVKPDQLRGALDRFVQFFLSPQFTESATERE 144
>U55372-1|AAA98002.2| 816|Caenorhabditis elegans Hypothetical
protein C02G6.2 protein.
Length = 816
Score = 44.0 bits (99), Expect = 9e-05
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 195 LDNGLRIA-TEDSGAATATVGLWIDAGSRYETSKNNGVAHFLEHMAFKGTSKRSQTD--L 365
L NGLR+ D + V L + AG + + G+AHF EHM F GTSK +
Sbjct: 31 LTNGLRVLLVSDPTTDKSAVSLAVKAGHLMDPWELPGLAHFCEHMLFLGTSKYPLENEFT 90
Query: 366 ELLVENMGAHLNAYTSREQTVFY 434
+ L +N G++ NA T + T ++
Sbjct: 91 KFLSDNAGSY-NACTEPDHTYYH 112
>U00048-11|AAB53833.1| 995|Caenorhabditis elegans Hypothetical
protein C05D11.1 protein.
Length = 995
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 13/115 (11%)
Frame = +3
Query: 282 ETSKNNGVAHFLEHMAFKGTSKRSQTDLELLVEN--MGAHLNAYTSREQTVFYAKCLAND 455
E ++G+ H LEH+ F G+ K + ++ N + NA+T + T + + +D
Sbjct: 51 EADSDDGLPHTLEHLVFMGSKKYPFKGVLDVIANRCLADGTNAWTDTDHTAYTLSTVGSD 110
Query: 456 -----VPVAVEILADIIQNSSLAEPEIER------ERGVILREMQDVESNLQEVV 587
+PV + L + +S E+ + GV+ EMQD ES ++ ++
Sbjct: 111 GFLKVLPVYINHLLTPMLTASQFATEVHHITGEGNDAGVVYSEMQDHESEMESIM 165
>AY008141-1|AAG32094.1| 375|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 393 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 563
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 564 ESNLQEVVFDHL 599
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>AF039715-1|AAB96733.2| 375|Caenorhabditis elegans G protein,
subunit alpha protein 1 protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 393 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 563
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 564 ESNLQEVVFDHL 599
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>AB003487-1|BAA22402.1| 375|Caenorhabditis elegans G protein alpha
subunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 393 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 563
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 564 ESNLQEVVFDHL 599
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>AB003486-1|BAA22401.1| 375|Caenorhabditis elegans G protein a(s)
subunit protein.
Length = 375
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 393 HLNAYTS---REQTVFYAKCLANDVPVAVEILADIIQNSSLAEPEIERERGVILREMQDV 563
H+N + RE+ + + + + V + + +I+ SL +P R ILR D
Sbjct: 60 HINGFNEAEKREKITDIRRNVRDAMQVILRAMDEIVPKVSLDDPSTAISRDYILRITNDP 119
Query: 564 ESNLQEVVFDHL 599
E N +DH+
Sbjct: 120 EDNYPSEFYDHI 131
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 412 PGNKQFFTQNASLMTSP*Q*RSLLISY-RIPPSPNPKSNENAVSFFAK 552
P N F QN+S+ SP Q R + +S +PP + + ++A+S +K
Sbjct: 141 PSNTAFKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAISSLSK 188
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 412 PGNKQFFTQNASLMTSP*Q*RSLLISY-RIPPSPNPKSNENAVSFFAK 552
P N F QN+S+ SP Q R + +S +PP + + ++A+S +K
Sbjct: 108 PSNTAFKEQNSSMPLSPAQERWISMSIGAVPPPTSSAAEKDAISSLSK 155
>Z68215-15|CAN86580.1| 1544|Caenorhabditis elegans Hypothetical
protein C53B4.4e protein.
Length = 1544
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 105 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 284
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 891 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 942
Query: 285 TSKNNGVAHFLEHMAFKGTSKRSQTD 362
T N + MA G K S +D
Sbjct: 943 TDTNRDPSIGRSPMAVVGKRKESPSD 968
>Z68215-11|CAH60786.1| 1301|Caenorhabditis elegans Hypothetical
protein C53B4.4d protein.
Length = 1301
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 105 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 284
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 611 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 662
Query: 285 TSKNNGVAHFLEHMAFKGTSKRSQTD 362
T N + MA G K S +D
Sbjct: 663 TDTNRDPSIGRSPMAVVGKRKESPSD 688
>Z68215-6|CAB54213.2| 1304|Caenorhabditis elegans Hypothetical
protein C53B4.4c protein.
Length = 1304
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 105 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 284
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 611 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 662
Query: 285 TSKNNGVAHFLEHMAFKGTSKRSQTD 362
T N + MA G K S +D
Sbjct: 663 TDTNRDPSIGRSPMAVVGKRKESPSD 688
>Z68215-5|CAA92456.1| 1586|Caenorhabditis elegans Hypothetical protein
C53B4.4b protein.
Length = 1586
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 105 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 284
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 891 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 942
Query: 285 TSKNNGVAHFLEHMAFKGTSKRSQTD 362
T N + MA G K S +D
Sbjct: 943 TDTNRDPSIGRSPMAVVGKRKESPSD 968
>Z68215-4|CAA92457.1| 1584|Caenorhabditis elegans Hypothetical protein
C53B4.4a protein.
Length = 1584
Score = 28.7 bits (61), Expect = 3.7
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 105 SSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRIATEDSGAATATVGLWIDAGSRYE 284
S+ + + AT AA K+ ++++ P K R T+ S ++ + DAGS Y+
Sbjct: 891 SASTRKAKIQATFAAGKKKVLDLMPQK--------RKNTDASDLNGESIEIGADAGSLYD 942
Query: 285 TSKNNGVAHFLEHMAFKGTSKRSQTD 362
T N + MA G K S +D
Sbjct: 943 TDTNRDPSIGRSPMAVVGKRKESPSD 968
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.4
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +3
Query: 78 KVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRI-ATEDSGAATATVG 254
K+ T+ +I +QG Q R++ + V P D G GAA A V
Sbjct: 1901 KITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLDRGGGAADAKVA 1960
Query: 255 LWIDAGSRYETSKNNGVAHFLEHMAFKGTSKR 350
GS +N +A L+H+A T+ R
Sbjct: 1961 RAGLDGSNPLVIASNDLAE-LDHIAIDTTNTR 1991
>U39742-2|AAM51521.1| 321|Caenorhabditis elegans Hypothetical
protein C25F6.7b protein.
Length = 321
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 502 PSPNPKSNENAVSFFAKCKMSKVTFRRLCLITF 600
PSP+P ENAV+ + +K+TF + + +F
Sbjct: 93 PSPSPPDYENAVNARRMRRCTKLTFTLISIFSF 125
>U39742-1|AAK39198.1| 322|Caenorhabditis elegans Hypothetical
protein C25F6.7a protein.
Length = 322
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 502 PSPNPKSNENAVSFFAKCKMSKVTFRRLCLITF 600
PSP+P ENAV+ + +K+TF + + +F
Sbjct: 94 PSPSPPDYENAVNARRMRRCTKLTFTLISIFSF 126
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.4
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = +3
Query: 78 KVATTLRVISSQGNQVRTLATAAAYKQALVNVPPTKLTVLDNGLRI-ATEDSGAATATVG 254
K+ T+ +I +QG Q R++ + V P D G GAA A V
Sbjct: 1901 KITQTIEIIRTQGKQYRSVILSNDQSPTAVVTPVAIAVDADKGYVFWLDRGGGAADAKVA 1960
Query: 255 LWIDAGSRYETSKNNGVAHFLEHMAFKGTSKR 350
GS +N +A L+H+A T+ R
Sbjct: 1961 RAGLDGSNPLVIASNDLAE-LDHIAIDTTNTR 1991
>U50066-2|AAA93438.2| 202|Caenorhabditis elegans Hypothetical
protein T14A8.2 protein.
Length = 202
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -2
Query: 256 SPTVAVAAPESSVAIRKPLSSTVSLVGGTFTNACLYAAAV 137
S T + ++ E S + P+SS S V F C+Y A+
Sbjct: 163 SETSSSSSEEPSTSSETPVSSATSFVSSLFVLVCVYLIAM 202
>AF067216-10|AAC17519.1| 492|Caenorhabditis elegans Hypothetical
protein C35E7.3 protein.
Length = 492
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 53 YKDHNKNVESSNHFESNFQPGQSGTYVSNRSCIQTGISKC 172
YKD+ K ++ +F +F+ G++ Y+ N +Q KC
Sbjct: 282 YKDNCKKLDMPIYFGYHFEEGKTRKYLFNNRTLQFERIKC 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,020,274
Number of Sequences: 27780
Number of extensions: 317435
Number of successful extensions: 967
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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