Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b13
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.8  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    22   5.5  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   9.7  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 342  YFDQEFSLNEFIEASKHAVQIVSG 413
            YF+  FSLN +IE      +IV G
Sbjct: 2539 YFNANFSLNYWIEKGADPGKIVMG 2562


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 165 HYYKRFYRIAVTIASLKHALILNSYFANNYQNIIQ 61
           HY  R Y+++V I +    +I+ S+  N Y  IIQ
Sbjct: 148 HY--RLYQLSVLIDNNMSYIIIVSFATNLYFIIIQ 180


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 366 NEFIEASKHAVQIVSGALQN 425
           N+F + +K  +  VSG L+N
Sbjct: 4   NQFKDFAKEMIDYVSGYLEN 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,519
Number of Sequences: 336
Number of extensions: 3744
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)