Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b11
         (189 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0728 - 20141785-20142014,20142839-20142923,20143031-201431...    25   8.5  
08_01_0948 - 9405356-9406042,9406214-9406303,9406533-9406644,940...    25   8.5  

>10_08_0728 -
           20141785-20142014,20142839-20142923,20143031-20143148,
           20143163-20143163,20143229-20143751
          Length = 318

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 181 FICHTFYLYSYDYKTQ 134
           F+CH  Y  +Y+YK Q
Sbjct: 161 FLCHLAYTLAYNYKRQ 176


>08_01_0948 -
           9405356-9406042,9406214-9406303,9406533-9406644,
           9407065-9407162,9407494-9407697,9407796-9408285,
           9409711-9409715
          Length = 561

 Score = 25.0 bits (52), Expect = 8.5
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -3

Query: 172 HTFYLYSYDYKTQYTDYL*YSCCDKKAIIKLTKLSTS*SWKIF 44
           HTF L+SY ++T    ++  +   ++   K+ ++  S  WK F
Sbjct: 462 HTFRLHSYQWRTWAARFIQSAWRRRQNRQKMAEVGLSNRWKSF 504


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,600,560
Number of Sequences: 37544
Number of extensions: 40051
Number of successful extensions: 81
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81
length of database: 14,793,348
effective HSP length: 42
effective length of database: 13,216,500
effective search space used: 264330000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)