Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6b11
(189 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 19 4.1
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 19 5.4
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 19 7.2
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 19 7.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 19 7.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 19 7.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 19 7.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 19 7.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 19 7.2
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 18 9.5
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 18 9.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 18 9.5
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 19.4 bits (38), Expect = 4.1
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 183 FSSVILFICTLMITKLNTRITYNIVVVTKKR**N*-QNYQQVNHGKFFNVE 34
F+S +LFI ++ ++ + IVV N + YQ++ +G F N E
Sbjct: 84 FASFLLFI---LLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSE 131
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -3
Query: 187 FFFICHTFYLYSYDYKTQYTDY 122
FF + FY ++Y +++ +Y
Sbjct: 434 FFLAINVFYWFAYLSRSERINY 455
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 59 IMENFSTLNNNN 24
I++NF+ L+ NN
Sbjct: 66 ILKNFNILDKNN 77
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 50 NFSTLNNNN 24
N+S NNNN
Sbjct: 90 NYSNYNNNN 98
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 50 NFSTLNNNN 24
N+S NNNN
Sbjct: 90 NYSNYNNNN 98
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 50 NFSTLNNNN 24
N+S NNNN
Sbjct: 90 NYSNYNNNN 98
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 50 NFSTLNNNN 24
N+S NNNN
Sbjct: 90 NYSNYNNNN 98
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 50 NFSTLNNNN 24
N+S NNNN
Sbjct: 90 NYSNYNNNN 98
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 18.6 bits (36), Expect = 7.2
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -2
Query: 50 NFSTLNNNN 24
N+S NNNN
Sbjct: 90 NYSNYNNNN 98
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +2
Query: 26 CCYSTLKNFP 55
CC S L FP
Sbjct: 400 CCRSWLSKFP 409
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = +2
Query: 26 CCYSTLKNFP 55
CC S L FP
Sbjct: 400 CCRSWLSKFP 409
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 18.2 bits (35), Expect = 9.5
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 106 NNYIISNPCIEFCNHKSTNKK 168
NNY +N + N+ +TN K
Sbjct: 90 NNYNYNNNYNNYNNNYNTNYK 110
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,543
Number of Sequences: 438
Number of extensions: 665
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used: 2558940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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