Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6b09
(278 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0737 - 19822822-19822973,19823069-19823135,19823666-198238... 29 0.70
05_01_0493 + 4113869-4116728,4116859-4117370 28 1.2
12_01_0302 - 2286171-2286341,2286747-2286968 27 2.1
02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321... 27 2.1
11_02_0038 - 7631462-7634428,7635975-7636250 27 2.8
09_02_0400 - 8574836-8575121,8575473-8575549 26 3.7
03_05_0150 - 21283723-21284008,21284338-21284414 26 3.7
02_04_0192 + 20795659-20796309 26 3.7
01_01_0490 + 3620523-3623403,3623524-3623996 26 4.9
12_02_0786 + 23139854-23139901,23140054-23140122,23140531-231405... 25 6.5
12_02_0670 - 21700523-21700932,21701266-21701390,21701476-217016... 25 6.5
11_06_0160 - 20794974-20795977,20796241-20796295 25 6.5
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 25 6.5
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 25 8.6
06_03_0585 - 22528082-22530100 25 8.6
06_03_0580 + 22489184-22491202 25 8.6
06_02_0011 - 10569471-10572245 25 8.6
02_05_0713 + 31159574-31160764 25 8.6
01_07_0147 - 41474003-41474308,41474706-41474750 25 8.6
01_07_0143 - 41443030-41443335,41443733-41443777 25 8.6
01_01_0540 + 3957622-3960903 25 8.6
>09_04_0737 -
19822822-19822973,19823069-19823135,19823666-19823822,
19824003-19824177,19824364-19824481,19824676-19824874,
19824983-19825062,19825141-19825257,19825791-19825961,
19826121-19826597
Length = 570
Score = 28.7 bits (61), Expect = 0.70
Identities = 18/49 (36%), Positives = 25/49 (51%)
Frame = -2
Query: 214 FYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLKNRPDVVV 68
F+VD G G + ++++LAV+ G R CR VV DVVV
Sbjct: 93 FHVDPTGDGSSFLQLHRLAVE-GTRRLLAACCRSGVRTVVYTGSADVVV 140
>05_01_0493 + 4113869-4116728,4116859-4117370
Length = 1123
Score = 27.9 bits (59), Expect = 1.2
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +2
Query: 44 TPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVS 187
+PP+D LY + + D +L A++ S E+YR + S V+
Sbjct: 753 SPPWDVTLYQKLEIGVSDVARSLTPANVIGHGWSGEVYRASMPSSGVT 800
>12_01_0302 - 2286171-2286341,2286747-2286968
Length = 130
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 206 RLQRSRKKHGENLPTGGRSRRKGEKLE*MQREEQ 105
RL+R RK + ++ G + +GEKLE + +E+
Sbjct: 57 RLERLRKGYARDVRAAGAMKVRGEKLENWREKEK 90
>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
16032434-16032715,16032790-16032948,16033034-16033390,
16033482-16033622,16033919-16034045,16034121-16034263,
16034740-16034917,16035019-16035552,16035628-16035812,
16036551-16036637,16036710-16036850,16036896-16037175,
16037944-16038020,16038326-16039138,16039292-16039801,
16039926-16040056,16040192-16040246,16040364-16040564,
16040640-16040909,16041103-16041184,16041271-16041434,
16041532-16041690,16041762-16042083,16042158-16042544,
16042811-16042999,16043233-16043317,16043458-16043753,
16043862-16043965,16044484-16044513,16044602-16044817,
16044923-16045540,16045718-16045993,16046619-16046762,
16046854-16046962,16047291-16047475,16047557-16047670,
16048348-16048479,16048929-16049249,16049424-16049891,
16054482-16054547,16054691-16054828,16054917-16055015,
16057098-16057194,16057661-16057761,16057858-16058085,
16059175-16059381,16059451-16059571,16059921-16059988,
16060148-16060213,16060396-16060509,16060949-16061300,
16063571-16063663,16063764-16063922,16064224-16064287,
16064385-16064577,16064673-16064710,16065510-16065645,
16065726-16065914,16065994-16066095,16067660-16067777,
16067861-16067964,16070338-16070346,16071428-16071475,
16071581-16071676,16072430-16072533,16073964-16074045,
16076573-16076601,16076708-16076963
Length = 4246
Score = 27.1 bits (57), Expect = 2.1
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 11 VYVFDPSCYFSTPPFDTVLYD-NIRTVLK-DNKTALLSASIQAS 136
V + D SC TP FDT + + N+ T K + A+L SI AS
Sbjct: 2535 VSILDSSCGMVTPIFDTTIANINLATHGKFETMNAVLICSISAS 2578
>11_02_0038 - 7631462-7634428,7635975-7636250
Length = 1080
Score = 26.6 bits (56), Expect = 2.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 32 CYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQ 130
CYF P + + +R + NKT +LS+ ++
Sbjct: 585 CYFDQLPLEPTTWSKLRRISIVNKTDMLSSVVE 617
>09_02_0400 - 8574836-8575121,8575473-8575549
Length = 120
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 15 TSSIPPATFQLLPSIPYC 68
T+S+PP++ QLL S P C
Sbjct: 100 TASLPPSSIQLLASPPRC 117
>03_05_0150 - 21283723-21284008,21284338-21284414
Length = 120
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 15 TSSIPPATFQLLPSIPYC 68
T+S+PP++ QLL S P C
Sbjct: 100 TASLPPSSIQLLASPPRC 117
>02_04_0192 + 20795659-20796309
Length = 216
Score = 26.2 bits (55), Expect = 3.7
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +1
Query: 85 GS*GQQNCSSLCIYSSFSPFLRDLPPVGRFSPCFFRLLWS-LRKILIPYS 231
G G + S SS SPF+ LPP SP F R L S LR +P+S
Sbjct: 33 GGGGSSSSFSSTNSSSSSPFVSFLPPPTSPSP-FHRFLPSPLRASSVPFS 81
>01_01_0490 + 3620523-3623403,3623524-3623996
Length = 1117
Score = 25.8 bits (54), Expect = 4.9
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 47 PPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVS 187
PP+D LY + + D +L A++ S +YR + S V+
Sbjct: 765 PPWDVTLYQKLEISVGDVARSLTPANVIGQGWSGAVYRASIPSTGVA 811
>12_02_0786 +
23139854-23139901,23140054-23140122,23140531-23140544,
23140603-23140675,23140875-23140979,23141817-23142080,
23142159-23142251,23142381-23142587,23143155-23143258,
23143436-23143502,23143576-23143683,23143943-23144033,
23144123-23144193,23144421-23144549,23144659-23144766
Length = 516
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +1
Query: 118 CIYSSF-SPFLRDLPPVGRFSPCFFRLL 198
C Y + S R PP GRFSP ++L
Sbjct: 361 CEYHGYLSDLTRTWPPCGRFSPAQVKML 388
>12_02_0670 -
21700523-21700932,21701266-21701390,21701476-21701651,
21702937-21703128
Length = 300
Score = 25.4 bits (53), Expect = 6.5
Identities = 8/24 (33%), Positives = 17/24 (70%)
Frame = +1
Query: 94 GQQNCSSLCIYSSFSPFLRDLPPV 165
G++ C+++ Y+S+ PF + + PV
Sbjct: 76 GKEECTAVLFYASWCPFSQRMRPV 99
>11_06_0160 - 20794974-20795977,20796241-20796295
Length = 352
Score = 25.4 bits (53), Expect = 6.5
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -1
Query: 224 GIKILRRLQRSRKKHGENLPTGGRSRR 144
G +LRR + SR++HG L G +R+
Sbjct: 166 GGALLRRAESSRRQHGRALREGREARQ 192
>09_04_0042 - 14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 23 DPSCYFSTPPFDTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQL 166
+PS + PP +D+I + + T LL AS+ S S + +R L
Sbjct: 1171 NPSYSKAIPPVRIHSFDSIFRLHQRESTGLLPASLHLSSKSVDSFRDL 1218
>11_01_0334 +
2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 25.0 bits (52), Expect = 8.6
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +2
Query: 56 DTVLYDNIRTVLKDNKTALLSASIQASLPSSEIYRQLVDSRHVSSD 193
D + DNI ++D + ALL A + SLP + + V + V +D
Sbjct: 549 DQLTKDNIAEPMRDIRRALLEADV--SLPVVRSFIESVTEKAVGTD 592
>06_03_0585 - 22528082-22530100
Length = 672
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSIPPATFQLLPSIPYCTTTSGRFL 92
+S PPAT +LL S +S RFL
Sbjct: 89 ASFPPATGRLLESFVNSAVSSSRFL 113
>06_03_0580 + 22489184-22491202
Length = 672
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 18 SSIPPATFQLLPSIPYCTTTSGRFL 92
+S PPAT +LL S +S RFL
Sbjct: 89 ASFPPATGRLLESFVNSAVSSSRFL 113
>06_02_0011 - 10569471-10572245
Length = 924
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 187 FRLLWSLRKILI 222
F+LLWSLRK LI
Sbjct: 15 FKLLWSLRKYLI 26
>02_05_0713 + 31159574-31160764
Length = 396
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 226 KGLRFYVDSKGVGRNMARIYQLAVDLGGRERSLNRCREKSSFVVLK 89
+G R SKG +M++I+Q + G + C E +SF +K
Sbjct: 341 EGKRICAKSKGESFSMSKIWQWSNVKGKLPAGSDNCSETASFPWMK 386
>01_07_0147 - 41474003-41474308,41474706-41474750
Length = 116
Score = 25.0 bits (52), Expect = 8.6
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 199 KGVGRNMARIYQLAVDLGGRERSLNRCREK-SSFVVLKNRPDVVVQYGIEGRS*KVAGGI 23
+G G A + + G ER R R+ S VVL R + +EG +A GI
Sbjct: 43 RGFGAQAAALALPILAPRGGERHGERVRKTVESSVVLPKRATTGSTWKVEGIGLGIASGI 102
Query: 22 ED 17
ED
Sbjct: 103 ED 104
>01_07_0143 - 41443030-41443335,41443733-41443777
Length = 116
Score = 25.0 bits (52), Expect = 8.6
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = -2
Query: 199 KGVGRNMARIYQLAVDLGGRERSLNRCREK-SSFVVLKNRPDVVVQYGIEGRS*KVAGGI 23
+G G A + + G ER R R+ S VVL R + +EG +A GI
Sbjct: 43 RGFGAQAAALALPILAPRGGERHGERVRKTVESSVVLPKRATTGSTWKVEGIGLGIASGI 102
Query: 22 ED 17
ED
Sbjct: 103 ED 104
>01_01_0540 + 3957622-3960903
Length = 1093
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 115 LCIYSSFSPFLRDLPPVG 168
L + SSF PF RD P+G
Sbjct: 17 LAVVSSFDPFHRDANPMG 34
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,178,491
Number of Sequences: 37544
Number of extensions: 128472
Number of successful extensions: 367
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 367
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 267635896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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