Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b07
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    25   2.0  
AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant r...    23   6.3  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   8.3  

>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 72  PFADTDTIYSSIFVN*SESEL 134
           P ++T TIY+S+  N S SEL
Sbjct: 102 PLSNTYTIYTSVLANDSGSEL 122


>AF364132-1|AAL35508.1|  397|Anopheles gambiae putative odorant
           receptor Or4 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 7/25 (28%), Positives = 17/25 (68%)
 Frame = +3

Query: 501 VYGDLVCFCFECSCYQSFLFETKNI 575
           +YG  + F ++ + +Q+F+ E K++
Sbjct: 78  IYGGSMFFAYDVATFQAFIQELKSL 102


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 571 TLLIFSFMCFYLFNII 618
           T   F+F+C YLF II
Sbjct: 228 TCYTFTFICLYLFFII 243


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 495,346
Number of Sequences: 2352
Number of extensions: 7597
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)