Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b06
         (586 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86B72 Cluster: CG33204-PA; n=1; Drosophila melanogaste...    36   0.70 
UniRef50_Q22L22 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_UPI0000F1F393 Cluster: PREDICTED: hypothetical protein;...    34   2.8  
UniRef50_A4RHT8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q2GJN6 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q86B72 Cluster: CG33204-PA; n=1; Drosophila
           melanogaster|Rep: CG33204-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 904

 Score = 35.9 bits (79), Expect = 0.70
 Identities = 18/39 (46%), Positives = 25/39 (64%)
 Frame = +2

Query: 320 PRRQRYNRASTTSVTQLLSDGYSSFINRLTRRGPSEKSD 436
           P+R+    A+  SVTQLLS+  +S + R  RR PSE+ D
Sbjct: 43  PQRRYMRSATAASVTQLLSESCNSLLQRF-RRNPSERPD 80


>UniRef50_Q22L22 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 580

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = +2

Query: 287 ASLTSNNSTTSPRRQRYNRASTTSVTQLLSDGYSSFINRLTRRGPSEKSDTAVDSK 454
           +SLT N STT+ + Q+Y  +  T+   LLS   +SF N   R   SEK+    + K
Sbjct: 156 SSLTPN-STTNRKNQQYQHSLFTNTNNLLSPKNNSFHNNQIRMSISEKAQQPQEPK 210


>UniRef50_UPI0000F1F393 Cluster: PREDICTED: hypothetical protein;
           n=3; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 475

 Score = 33.9 bits (74), Expect = 2.8
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 296 TSNNSTTSPRRQRYNRASTTSVTQLLSDGYSSFINRLTRRGPSEKSDTAVD 448
           TSN+    P+R R NR   +S  ++LS+  S F +++ R+     SD   D
Sbjct: 321 TSNSPKPEPQRNRINRFLKSSSLEILSEPQSHFTDQVQRQESGSFSDDGTD 371


>UniRef50_A4RHT8 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 611

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 314 TSPRRQRYNRASTTSVTQLLSDGYSSFINRLTRR-GPSEKSDTAVDSKLTIP 466
           T+ + +RYN+    +V+  L+  Y   ++ LTRR G S  + T +D  LT P
Sbjct: 150 TAAQLRRYNKTVVDAVSDYLTQIYKHTLDTLTRRYGESFMASTKIDFVLTCP 201


>UniRef50_Q2GJN6 Cluster: Putative uncharacterized protein; n=1;
           Anaplasma phagocytophilum HZ|Rep: Putative
           uncharacterized protein - Anaplasma phagocytophilum
           (strain HZ)
          Length = 453

 Score = 32.3 bits (70), Expect = 8.7
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
 Frame = +3

Query: 12  HYLAPTAALACASDLFEIC--SVRA*VRSESLDRPSLGPLVNNECRKLGIVKMKSLCSV* 185
           H    TAA  C  D FE    ++R  +R  S D P +    +  C     +  K+L  + 
Sbjct: 235 HTDTDTAARVCLGDSFEALLENIREAIRRVS-DAPGVTARASCSCT----LANKALARIQ 289

Query: 186 SLFENYVGCRILRDLSWFKECYCFSTLL*NY 278
           ++FENYV     RD     E Y  +T++  Y
Sbjct: 290 AMFENYVNGTHARDSDLSDEMYMSTTIVSAY 320


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,508,416
Number of Sequences: 1657284
Number of extensions: 9736758
Number of successful extensions: 22517
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22504
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)