Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b06
         (586 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.5  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   3.3  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   5.8  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   5.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.8  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   7.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   7.7  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -3

Query: 383 SRPTTAESHWWWTHDYNVDAVDSSCCCYWLNW 288
           + P  +  H  W   Y +   ++SC  YW  W
Sbjct: 90  ANPPISTEHCDWL--YGIFGHETSCTRYWTCW 119


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -2

Query: 183 THYIMISFSLFPACGTH 133
           T  I   FS FP CG H
Sbjct: 689 TQLIYRPFSHFPRCGNH 705


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 87  RSESLDRPSLGPLVNNECRKLGIVKMKSLCSV 182
           + ++   P  G   +  C K GIV+  S CSV
Sbjct: 426 KPQTTKTPESGNESDGVCTKEGIVRDPSDCSV 457


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 163 IFTIPSLRHSLFTSGPRLGLSRD 95
           I+T  S RH+  ++  R G+S D
Sbjct: 283 IYTAHSTRHAATSAAARKGISLD 305


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 111  WVYLEIQSVPRREPNKFQK 55
            W   E+  VP+ +PN  QK
Sbjct: 1032 WGTREVTVVPKPDPNAVQK 1050


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 111  WVYLEIQSVPRREPNKFQK 55
            W   E+  VP+ +PN  QK
Sbjct: 1032 WGTREVTVVPKPDPNAVQK 1050


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -2

Query: 168 ISFSLFPACGTHCSLAVPDWVY 103
           I  + FP    HC +    W Y
Sbjct: 130 IDITWFPFDDQHCDMKFGSWTY 151


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 192 FENYVGCRILRDLSWFKECYCF 257
           F   +GC I  +   F  CYC+
Sbjct: 255 FPIIIGCLIQFNTIVFSFCYCY 276


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 36   LACASDLFEICSV 74
            + CA+D+F IC V
Sbjct: 1003 IICAADVFYICHV 1015


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 509 VMKCYWKSYH*NEIAVSSV 453
           V+  Y KS+H NEI +  V
Sbjct: 48  VVSIYSKSFHRNEIHIKIV 66


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 36  LACASDLFEICSV 74
           + CA+D+F IC V
Sbjct: 284 IICAADVFYICHV 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,988
Number of Sequences: 336
Number of extensions: 2453
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)