Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b05
         (231 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   2.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   2.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    19   5.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    19   6.8  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    19   9.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    19   9.0  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    19   9.0  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
          growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 76 EIVLYYDNTIHYR 38
          ++V YYD+  H+R
Sbjct: 25 KVVCYYDSKSHFR 37


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 190 SGLYSGINPLTVDTFRNR 137
           +G +SG+ P  VDT  N+
Sbjct: 217 TGHHSGLYPSAVDTTTNQ 234


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 19.4 bits (38), Expect = 5.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 107 RCR*IKRNNTRNSSILRQHD 48
           RCR +    TR + IL Q+D
Sbjct: 682 RCRLLSERLTRWTLILGQYD 701


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 19.0 bits (37), Expect = 6.8
 Identities = 5/10 (50%), Positives = 10/10 (100%)
 Frame = +1

Query: 13  LCLVNLLIIC 42
           +CL++L+I+C
Sbjct: 265 VCLLSLIILC 274


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
          protein protein.
          Length = 372

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 22 VNLLIICSVSCC 57
          +N+LI   V+CC
Sbjct: 3  LNMLIYLIVACC 14


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 5/15 (33%), Positives = 7/15 (46%)
 Frame = +3

Query: 90  FNLPTSFCLWPDAVR 134
           +N     C WPD  +
Sbjct: 144 YNDKAGICSWPDEAK 158


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 18.6 bits (36), Expect = 9.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 74  FSYCFV*FTDIVLLVAGRRSGSIPERIN 157
           FSYC +  T I+ +     +  I +R+N
Sbjct: 159 FSYCPIVTTGIIKIQFATCAHLILQRVN 186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,985
Number of Sequences: 336
Number of extensions: 983
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3213870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)