Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6b05
         (231 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060814-1|AAL28362.1|  172|Drosophila melanogaster GH28366p pro...    27   2.7  
AE013599-743|AAF59023.2|  172|Drosophila melanogaster CG8248-PA ...    27   2.7  
AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p pro...    27   3.5  
AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA...    27   3.5  

>AY060814-1|AAL28362.1|  172|Drosophila melanogaster GH28366p
           protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 145 RNRTRTASGHKQNDVGKLNETIREIVLYYDNTIHYRLLTN*RDTKQ 8
           R   ++  GHK+ +VGK + T   I+  +     Y LL    D  Q
Sbjct: 85  RRLIKSPEGHKKKEVGKKSNTAEPIIYLFALVFVYLLLKAASDINQ 130


>AE013599-743|AAF59023.2|  172|Drosophila melanogaster CG8248-PA
           protein.
          Length = 172

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -3

Query: 145 RNRTRTASGHKQNDVGKLNETIREIVLYYDNTIHYRLLTN*RDTKQ 8
           R   ++  GHK+ +VGK + T   I+  +     Y LL    D  Q
Sbjct: 85  RRLIKSPEGHKKKEVGKKSNTAEPIIYLFALVFVYLLLKAASDINQ 130


>AY094815-1|AAM11168.1| 1824|Drosophila melanogaster LD31957p protein.
          Length = 1824

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 13   LCLVNLLIICSVSCCRNIELFLVLFRLIYRHRFACG 120
            +CL+  LI+C  S C   EL  V       H  ACG
Sbjct: 1702 MCLICGLILCGQSYCCQPELGKVSVGACTHHAHACG 1737


>AE014298-2509|AAF48687.2| 1824|Drosophila melanogaster CG9086-PA
            protein.
          Length = 1824

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = +1

Query: 13   LCLVNLLIICSVSCCRNIELFLVLFRLIYRHRFACG 120
            +CL+  LI+C  S C   EL  V       H  ACG
Sbjct: 1702 MCLICGLILCGQSYCCQPELGKVSVGACTHHAHACG 1737


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,045,196
Number of Sequences: 53049
Number of extensions: 152173
Number of successful extensions: 478
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 24,988,368
effective HSP length: 56
effective length of database: 22,017,624
effective search space used: 440352480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)