Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6a17
         (763 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-P...    44   2e-04
BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p pro...    36   0.080
BT021397-1|AAX33545.2|  613|Drosophila melanogaster LD13921p pro...    35   0.14 
BT010095-1|AAQ22564.1|  613|Drosophila melanogaster GM02829p pro...    35   0.14 
AE014297-1260|AAF54607.1|  613|Drosophila melanogaster CG6689-PA...    35   0.14 
AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-P...    34   0.18 
BT025948-1|ABG02192.1|  114|Drosophila melanogaster IP14845p pro...    31   1.7  
AY118672-1|AAM50532.1|  139|Drosophila melanogaster AT03213p pro...    31   1.7  
AE014297-3815|AAN14057.1|  146|Drosophila melanogaster CG12250-P...    31   1.7  
AE014297-3814|AAF56479.2|  139|Drosophila melanogaster CG12250-P...    31   1.7  
BT023931-1|ABB36435.1| 1135|Drosophila melanogaster RE58741p pro...    30   4.0  
AE014297-1441|AAF54739.2| 1111|Drosophila melanogaster CG3532-PA...    30   4.0  
AE014134-3005|AAF53730.2|  716|Drosophila melanogaster CG10431-P...    29   5.2  

>AE014297-1481|AAF54781.2| 1169|Drosophila melanogaster CG10042-PB,
           isoform B protein.
          Length = 1169

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
 Frame = +2

Query: 50  KCSMRNCKNTTSKTLKKDGISYFRFPRDPIRCGEW--TSIVSQERRQDFFKPNSSNVVCS 223
           +C + NC +T S+ L+ +G++Y  FP DPI    W   S +S ER     +   S +VCS
Sbjct: 4   RCCVANCPST-SRLLEHNGVTYHSFPLDPIIRAIWIKNSRISLER-----QITKSVLVCS 57

Query: 224 EHFLDKDMYVSAKGIKRLLKTAV-PSVPDISAQDLEFIE 337
            HF   D      G K LLK  V P+V      D   IE
Sbjct: 58  RHFRRLDFNTIRNG-KYLLKPRVFPTVFPWGKMDTAEIE 95


>BT022206-1|AAY51600.2|  762|Drosophila melanogaster IP01025p
           protein.
          Length = 762

 Score = 35.5 bits (78), Expect = 0.080
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
 Frame = +2

Query: 53  CSMRNCKNTTSKTLKKDGISYFRFP---RDPIRCGEWTSIVSQERRQDFFKPNSSNVVCS 223
           C++ NC +   K +    IS+ RFP   +D ++  +W     +  +   + P+  + +CS
Sbjct: 5   CAVINCSH---KYVHAGSISFHRFPFKRKDLLQ--KWKEFTQRSAQ---WMPSKWSALCS 56

Query: 224 EHFLDKDMYVSAKGIKRLLKTAVPSV 301
            HF D+D   S    K L K AVPS+
Sbjct: 57  RHFGDEDFNCS-NNRKTLKKNAVPSI 81


>BT021397-1|AAX33545.2|  613|Drosophila melanogaster LD13921p
           protein.
          Length = 613

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
 Frame = +2

Query: 50  KCSMRNCKNTTSKTLKKDG-----ISYFRFPRDPIRCGEWTSIVSQERRQDFFKPNSSNV 214
           +C++ NC+N +    K++      + +FRFP+ P     W +           K   +  
Sbjct: 2   RCAVPNCRNFSDCRSKRNAAQQQRLGFFRFPKCPDTFKAWLAFCGYTEESLKLK---NPC 58

Query: 215 VCSEHFLDKDMYVSAK---GI--KRLLKT-AVPSV 301
           +C EHF D+D+  S K   G+  KR L+  AVP V
Sbjct: 59  ICIEHFKDEDIEGSLKFEMGLAKKRTLRPGAVPCV 93


>BT010095-1|AAQ22564.1|  613|Drosophila melanogaster GM02829p
           protein.
          Length = 613

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
 Frame = +2

Query: 50  KCSMRNCKNTTSKTLKKDG-----ISYFRFPRDPIRCGEWTSIVSQERRQDFFKPNSSNV 214
           +C++ NC+N +    K++      + +FRFP+ P     W +           K   +  
Sbjct: 2   RCAVPNCRNFSDCRSKRNAAQQQRLGFFRFPKCPDTFKAWLAFCGYTEESLKLK---NPC 58

Query: 215 VCSEHFLDKDMYVSAK---GI--KRLLKT-AVPSV 301
           +C EHF D+D+  S K   G+  KR L+  AVP V
Sbjct: 59  ICIEHFKDEDIEGSLKFEMGLAKKRTLRPGAVPCV 93


>AE014297-1260|AAF54607.1|  613|Drosophila melanogaster CG6689-PA
           protein.
          Length = 613

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
 Frame = +2

Query: 50  KCSMRNCKNTTSKTLKKDG-----ISYFRFPRDPIRCGEWTSIVSQERRQDFFKPNSSNV 214
           +C++ NC+N +    K++      + +FRFP+ P     W +           K   +  
Sbjct: 2   RCAVPNCRNFSDCRSKRNAAQQQRLGFFRFPKCPDTFKAWLAFCGYTEESLKLK---NPC 58

Query: 215 VCSEHFLDKDMYVSAK---GI--KRLLKT-AVPSV 301
           +C EHF D+D+  S K   G+  KR L+  AVP V
Sbjct: 59  ICIEHFKDEDIEGSLKFEMGLAKKRTLRPGAVPCV 93


>AE014134-3155|AAF53840.1| 3781|Drosophila melanogaster CG10631-PA
            protein.
          Length = 3781

 Score = 34.3 bits (75), Expect = 0.18
 Identities = 18/86 (20%), Positives = 40/86 (46%)
 Frame = +2

Query: 41   KMPKCSMRNCKNTTSKTLKKDGISYFRFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVC 220
            ++P   ++ C     +  + DGI  FR P +      W        ++      ++ ++C
Sbjct: 3520 QVPPWKVKQCCLPYCRAFRGDGIKLFRLPNNRTSIRNWELATGMVFKE---SQRNTRLIC 3576

Query: 221  SEHFLDKDMYVSAKGIKRLLKTAVPS 298
            S HF + ++     G++RL++ A+P+
Sbjct: 3577 SRHF-EPELI----GVRRLMRNAIPT 3597



 Score = 31.5 bits (68), Expect = 1.3
 Identities = 21/84 (25%), Positives = 39/84 (46%)
 Frame = +2

Query: 50  KCSMRNCKNTTSKTLKKDGISYFRFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEH 229
           +C +  C+ + S       +S +RFPRD +    W   +   R         ++ +CS H
Sbjct: 757 RCCLNFCRRSRSSDFN---MSLYRFPRDEVLLRRWCYNL---RLDPGVYRGKNHKICSAH 810

Query: 230 FLDKDMYVSAKGIKRLLKTAVPSV 301
           F+ +     A G+++L   AVP++
Sbjct: 811 FIKE-----ALGLRKLSPGAVPTL 829



 Score = 28.7 bits (61), Expect = 9.2
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 12/109 (11%)
 Frame = +2

Query: 53   CSMRNCKNTTSKTLKKDGISYFRFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHF 232
            C    C N++S     D +S+   P + +    W S ++         P+S  ++CSEHF
Sbjct: 2216 CLFPECSNSSS-----DQLSFVDLPGNAVIRDAWMSHLN-------LPPSSEGLLCSEHF 2263

Query: 233  L------DKDMYVSAKGIKRL------LKTAVPSVPDISAQDLEFIEIP 343
            +      +    ++A+ ++ L      L+ AVPS    S  DL+ I  P
Sbjct: 2264 MQLFEQVEYPKVLAAQDLEDLQWIVDELRCAVPSCSSKSDGDLQLIPFP 2312


>BT025948-1|ABG02192.1|  114|Drosophila melanogaster IP14845p
           protein.
          Length = 114

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 238 VQKMLRANDVRTIWLKKILTPFLTDD*CPFS 146
           V K+      RT+ L+K L PFL DD C FS
Sbjct: 19  VPKLKATPPTRTLLLRKNLVPFLDDDPCVFS 49


>AY118672-1|AAM50532.1|  139|Drosophila melanogaster AT03213p
           protein.
          Length = 139

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 238 VQKMLRANDVRTIWLKKILTPFLTDD*CPFS 146
           V K+      RT+ L+K L PFL DD C FS
Sbjct: 19  VPKLKATPPTRTLLLRKNLVPFLDDDPCVFS 49


>AE014297-3815|AAN14057.1|  146|Drosophila melanogaster CG12250-PB,
           isoform B protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 238 VQKMLRANDVRTIWLKKILTPFLTDD*CPFS 146
           V K+      RT+ L+K L PFL DD C FS
Sbjct: 19  VPKLKATPPTRTLLLRKNLVPFLDDDPCVFS 49


>AE014297-3814|AAF56479.2|  139|Drosophila melanogaster CG12250-PA,
           isoform A protein.
          Length = 139

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -1

Query: 238 VQKMLRANDVRTIWLKKILTPFLTDD*CPFS 146
           V K+      RT+ L+K L PFL DD C FS
Sbjct: 19  VPKLKATPPTRTLLLRKNLVPFLDDDPCVFS 49


>BT023931-1|ABB36435.1| 1135|Drosophila melanogaster RE58741p
           protein.
          Length = 1135

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +2

Query: 395 ENKEVKSPT-TSLSTGLILHIHTTERSTTDTPRKVDI-TSELHKFRRRLISKDKLINNLR 568
           EN+++KS      S+ L L I   E+S ++   K+   +SEL   +  L SK+  I  LR
Sbjct: 575 ENQKLKSKEKVKHSSVLNLEIEAAEKSLSEVSAKLTAKSSELEAVKESLASKENTIVQLR 634

Query: 569 KK 574
           K+
Sbjct: 635 KE 636


>AE014297-1441|AAF54739.2| 1111|Drosophila melanogaster CG3532-PA
           protein.
          Length = 1111

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +2

Query: 395 ENKEVKSPT-TSLSTGLILHIHTTERSTTDTPRKVDI-TSELHKFRRRLISKDKLINNLR 568
           EN+++KS      S+ L L I   E+S ++   K+   +SEL   +  L SK+  I  LR
Sbjct: 575 ENQKLKSKEKVKHSSVLNLEIEAAEKSLSEVSAKLTAKSSELEAVKESLASKENTIVQLR 634

Query: 569 KK 574
           K+
Sbjct: 635 KE 636


>AE014134-3005|AAF53730.2|  716|Drosophila melanogaster CG10431-PA
           protein.
          Length = 716

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +2

Query: 197 PNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVPSV 301
           P+  + +CS HF D+D   S    K L K AVPS+
Sbjct: 2   PSKWSALCSRHFGDEDFNCS-NNRKTLKKNAVPSI 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,223,751
Number of Sequences: 53049
Number of extensions: 626025
Number of successful extensions: 1990
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)