Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6a17
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division c... 39 0.003
AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosph... 39 0.003
AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical ... 30 1.6
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein. 29 3.6
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein... 29 3.6
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein... 29 3.6
Z66516-2|CAA91360.1| 418|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical ... 29 4.8
Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical pr... 28 8.3
U61947-7|AAB03137.1| 735|Caenorhabditis elegans Hypothetical pr... 28 8.3
AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical ... 28 8.3
>U28739-3|AAB93459.1| 1063|Caenorhabditis elegans Cell division cycle
related protein14, isoform b protein.
Length = 1063
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = +2
Query: 125 PRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVPSV- 301
P+ R W +I+ ++ R + +N +C +HF D S++G RLLKTAVP+V
Sbjct: 970 PKTEQRIARWVAILGEQFRIRL-RMKPANYMCRKHFPQADF--SSRG--RLLKTAVPNVV 1024
Query: 302 --PDISAQDLE---FIEIPDDGGDTEVCR-TCSMSDVEN 400
+ A LE F+E+ +D + ++ + T S D+EN
Sbjct: 1025 SQEKVLAFKLEGNTFVEVKEDNTNIKMEKGTDSEIDIEN 1063
>AY661744-1|AAT74543.1| 1063|Caenorhabditis elegans CDC-14 phosphatase
isoform B protein.
Length = 1063
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Frame = +2
Query: 125 PRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVPSV- 301
P+ R W +I+ ++ R + +N +C +HF D S++G RLLKTAVP+V
Sbjct: 970 PKTEQRIARWVAILGEQFRIRL-RMKPANYMCRKHFPQADF--SSRG--RLLKTAVPNVV 1024
Query: 302 --PDISAQDLE---FIEIPDDGGDTEVCR-TCSMSDVEN 400
+ A LE F+E+ +D + ++ + T S D+EN
Sbjct: 1025 SQEKVLAFKLEGNTFVEVKEDNTNIKMEKGTDSEIDIEN 1063
>AC006619-3|AAK68253.1| 943|Caenorhabditis elegans Hypothetical
protein C46C11.1 protein.
Length = 943
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/79 (26%), Positives = 33/79 (41%)
Frame = +2
Query: 233 LDKDMYVSAKGIKRLLKTAVPSVPDISAQDLEFIEIPDDGGDTEVCRTCSMSDVENKEVK 412
L D +S L K A+ PD+ D+E I+ P + G ++E
Sbjct: 652 LHDDDLISFLSHHPLTKYAMSHTPDMGEDDIELIDTPVELGLEATENLVIEEEIEALTSV 711
Query: 413 SPTTSLSTGLILHIHTTER 469
++ ST I +HTT+R
Sbjct: 712 DEVSTPSTENIQEVHTTKR 730
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/82 (24%), Positives = 32/82 (39%)
Frame = +2
Query: 344 DDGGDTEVCRTCSMSDVENKEVKSPTTSLSTGLILHIHTTERSTTDTPRKVDITSELHKF 523
+D +T + S + K +S L + E T + DI E+H
Sbjct: 48 NDAENTVLSEGVSTLRINENMTKEDRACISAALFIKKRVVESIRTVFQSRDDINDEIHTS 107
Query: 524 RRRLISKDKLINNLRKKNSRLV 589
R+LI+ K + RKK L+
Sbjct: 108 SRKLIAAFKKADQNRKKKVDLM 129
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/82 (24%), Positives = 32/82 (39%)
Frame = +2
Query: 344 DDGGDTEVCRTCSMSDVENKEVKSPTTSLSTGLILHIHTTERSTTDTPRKVDITSELHKF 523
+D +T + S + K +S L + E T + DI E+H
Sbjct: 48 NDAENTVLSEGVSTLRINENMTKEDRACISAALFIKKRVVESIRTVFQSRDDINDEIHTS 107
Query: 524 RRRLISKDKLINNLRKKNSRLV 589
R+LI+ K + RKK L+
Sbjct: 108 SRKLIAAFKKADQNRKKKVDLM 129
>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 119 RFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVP 295
R PR R W + E N+ N++C HF D S++G RLLK +P
Sbjct: 1153 RVPRSEERLARWVDKLGPEFEARLHT-NTENLICRSHF--PDAAFSSRG--RLLKGMIP 1206
>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical protein
ZK662.4 protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 119 RFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVP 295
R PR R W + E N+ N++C HF D S++G RLLK +P
Sbjct: 1153 RVPRSEERLARWVDKLGPEFEARLHT-NTENLICRSHF--PDAAFSSRG--RLLKGMIP 1206
>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 119 RFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVP 295
R PR R W + E N+ N++C HF D S++G RLLK +P
Sbjct: 1153 RVPRSEERLARWVDKLGPEFEARLHT-NTENLICRSHF--PDAAFSSRG--RLLKGMIP 1206
>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 119 RFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVP 295
R PR R W + E N+ N++C HF D S++G RLLK +P
Sbjct: 1153 RVPRSEERLARWVDKLGPEFEARLHT-NTENLICRSHF--PDAAFSSRG--RLLKGMIP 1206
>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
protein.
Length = 1440
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = +2
Query: 119 RFPRDPIRCGEWTSIVSQERRQDFFKPNSSNVVCSEHFLDKDMYVSAKGIKRLLKTAVP 295
R PR R W + E N+ N++C HF D S++G RLLK +P
Sbjct: 1153 RVPRSEERLARWVDKLGPEFEARLHT-NTENLICRSHF--PDAAFSSRG--RLLKGMIP 1206
>Z66516-2|CAA91360.1| 418|Caenorhabditis elegans Hypothetical
protein W03C9.2 protein.
Length = 418
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = -2
Query: 327 SRSCADISGTLGTAVLRRRFMPFALTYMSLSKKCSEQTTLELFGLKKS 184
S S +++GT+G+ V + F+ AL Y L KC E + L + KKS
Sbjct: 217 SDSSQELAGTIGS-VFAQAFV--ALVYQKLMVKCEENSNLLIEKSKKS 261
>AL132846-3|CAB60346.2| 1648|Caenorhabditis elegans Hypothetical
protein Y43D4A.5 protein.
Length = 1648
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 413 SPTTSLSTGLILHIHTTERSTTD--TPRKVDITSELHKFRRRLISKDKLINNLRKKNSRL 586
SP TS TG + E ++ TP+ D++ + KF LI + NL++K R+
Sbjct: 124 SPKTSAETGNDIEKILLEGNSVKGLTPKSRDVSKKPDKFMEDLIEVQRTYRNLKEKWHRM 183
Query: 587 V 589
+
Sbjct: 184 M 184
>Z79756-6|CAB02117.3| 693|Caenorhabditis elegans Hypothetical
protein F53C11.2 protein.
Length = 693
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +3
Query: 108 YRIFVFLVTQYDAENGHQSSVKKGVKIFLSQIVLTSFALSIFWTKTC-MSVQKA*SVFLK 284
+RI +F D N H S + + L S+A + FW+ + V K +FLK
Sbjct: 610 HRIVLFWFFNLDGINPHAYSTMQMFVFYSIPGTLLSYAFAFFWSSLFEVPVAKIEKIFLK 669
Query: 285 RLFLVYRIYQHRTSSLLKYRMMAV 356
+ VYR + ++ R A+
Sbjct: 670 PI-SVYRGKSTQAIETIRVRRSAM 692
>U61947-7|AAB03137.1| 735|Caenorhabditis elegans Hypothetical
protein C06G3.9 protein.
Length = 735
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 23 VSVRSLKMPKCSMRNCKNTTSKTLKKDGIS 112
VS+RS+ M K M C N + L+K GIS
Sbjct: 294 VSMRSMFMTKELMDQCINAVQEDLQKSGIS 323
>AC006835-1|AAF40015.2| 903|Caenorhabditis elegans Hypothetical
protein ZK993.2 protein.
Length = 903
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/91 (18%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Frame = +2
Query: 323 LEFIEIPDDGGDTEVCRTCSMSD--VEN------KEVKSPTTSLSTGLILHIHTTERSTT 478
++ IP GD +C C++ + EN +++++ + + + H E +
Sbjct: 588 IQSFAIPVSSGDFSICSNCAIDNHSDENHEILRVRDIENLEDIIKMEIYVKFHEDEETLE 647
Query: 479 DTPRKVDITSELHKFRRRLISKDKLINNLRK 571
D RK+ + +L K L++ + ++ N+ +
Sbjct: 648 DFYRKIILQYQLWKRGFDLLADENIVGNMEQ 678
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,681,204
Number of Sequences: 27780
Number of extensions: 347292
Number of successful extensions: 1072
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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