Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6a12
(646 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protei... 202 8e-51
UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e... 131 2e-29
UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25... 88 1e-16
UniRef50_P41481 Cluster: P18 protein; n=12; Nucleopolyhedrovirus... 42 0.013
UniRef50_A0Q3I3 Cluster: Sensor protein; n=1; Clostridium novyi ... 38 0.27
UniRef50_Q4PHN2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.27
UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21... 35 1.9
UniRef50_Q23JY6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q5KP57 Cluster: ER organization and biogenesis-related ... 35 1.9
UniRef50_Q9PR00 Cluster: Uncharacterized protein UU144; n=1; Ure... 35 1.9
UniRef50_A6KZV8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A4YQ81 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, wh... 34 2.6
UniRef50_Q3IDV8 Cluster: Putative flagellar hook-associated; n=2... 33 4.5
UniRef50_Q96GC5 Cluster: 39S ribosomal protein L48, mitochondria... 33 4.5
UniRef50_Q12753 Cluster: Transcriptional activator HAA1; n=2; Sa... 33 4.5
UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium... 33 5.9
UniRef50_Q8TZS7 Cluster: Adenosylmethionine-8-amino-7-oxononanoa... 33 5.9
UniRef50_Q1QUD7 Cluster: Response regulator receiver domain prot... 33 7.8
UniRef50_A0GZD5 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
UniRef50_Q5BVU1 Cluster: SJCHGC06557 protein; n=1; Schistosoma j... 33 7.8
>UniRef50_Q06906 Cluster: Occlusion-derived virus envelope protein
E25; n=14; Nucleopolyhedrovirus|Rep: Occlusion-derived
virus envelope protein E25 - Orgyia pseudotsugata
multicapsid polyhedrosis virus (OpMNPV)
Length = 229
Score = 202 bits (492), Expect = 8e-51
Identities = 93/156 (59%), Positives = 126/156 (80%), Gaps = 2/156 (1%)
Frame = +2
Query: 122 WTNA-LNLNSLTEASPSLGQSSESVESD-ENKRLNVKLNNARVANLRIAHGDNKLSQMYI 295
W N LNLNSLTE+SPSL QSS+SV+ D + ++LNVKL N ++ +R+AHGDNK+SQ+Y+
Sbjct: 18 WYNGKLNLNSLTESSPSLAQSSDSVQVDPQTEQLNVKLGNNKMTYMRVAHGDNKVSQVYV 77
Query: 296 AEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFK 475
AEKP+S+DDI K+G+ +VG NS+F+GTVYD GV+SPNA S++VT+TR TANFD+KE+K
Sbjct: 78 AEKPMSMDDIEKQGNARVGANSLFIGTVYDQGVRSPNAPGASNDVTVTRTTANFDVKEYK 137
Query: 476 SMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLIDPN 583
+MFIV KG+ P K +++ ML F VD + VCL+D N
Sbjct: 138 NMFIVVKGLPPAKMTKEDNMLCFTVDGLHVCLVDAN 173
>UniRef50_Q77K60 Cluster: Odv-e25; n=26; Baculoviridae|Rep: Odv-e25
- Helicoverpa armigera NPV
Length = 230
Score = 131 bits (316), Expect = 2e-29
Identities = 67/158 (42%), Positives = 98/158 (62%), Gaps = 8/158 (5%)
Frame = +2
Query: 128 NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKP 307
N LN +SL ++S GQSSES+ + +L +K N+ R+ +RI HGDNK+S++ +AE+P
Sbjct: 22 NKLNFDSLNDSS---GQSSESIRENNQGQLTLKFNSPRIKTMRILHGDNKISKVCVAERP 78
Query: 308 LSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS--------PNAASTSSNVTMTRGTANFDI 463
L+ +I+ EG+ VG N +F+GT+ + S +A +S T R TANFDI
Sbjct: 79 LTYSEIIDEGNRTVGANCVFMGTISEPSQTSTLNQQQQQQQSAGSSLPTTANRVTANFDI 138
Query: 464 KEFKSMFIVFKGITPTKTVEDNGMLRFEVDSMIVCLID 577
K+FK+ FIVFK + K E M+R+E D M+ CLID
Sbjct: 139 KQFKNTFIVFKNVEMIKIKESANMVRYESDGMVYCLID 176
>UniRef50_Q7T9T8 Cluster: Odv-e25; n=2; Granulovirus|Rep: Odv-e25 -
Adoxophyes orana granulovirus (AoGV)
Length = 217
Score = 88.2 bits (209), Expect = 1e-16
Identities = 53/153 (34%), Positives = 86/153 (56%), Gaps = 1/153 (0%)
Frame = +2
Query: 122 WTN-ALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIA 298
W N LN NSL +S S G +S++ NV NN + N+RIA+G+N S++
Sbjct: 19 WVNDKLNANSLNTSSESSG---DSIQFTPEGNANVIFNNTKSKNVRIAYGENNFSKIVAL 75
Query: 299 EKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKS 478
E P+ + I++ G +K G N+I LG + + N +++ N TR + N IK+FK+
Sbjct: 76 ETPIRHEQIIEHG-DKAGANTICLGIIKEN--LGSNVGNSNVN---TRFSNNLTIKQFKN 129
Query: 479 MFIVFKGITPTKTVEDNGMLRFEVDSMIVCLID 577
+FI FKG+ + + M+R+EV+ M+ L+D
Sbjct: 130 LFITFKGLDYVEIDSNMYMVRYEVNKMVYALLD 162
>UniRef50_P41481 Cluster: P18 protein; n=12;
Nucleopolyhedrovirus|Rep: P18 protein - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 161
Score = 41.9 bits (94), Expect = 0.013
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 3 SVLLKHLHNLNLIGIEIVN 59
SVLLKHLHNLNLIGIEIVN
Sbjct: 143 SVLLKHLHNLNLIGIEIVN 161
>UniRef50_A0Q3I3 Cluster: Sensor protein; n=1; Clostridium novyi
NT|Rep: Sensor protein - Clostridium novyi (strain NT)
Length = 779
Score = 37.5 bits (83), Expect = 0.27
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = -2
Query: 591 APVLGSIKHTIMLSTSNRNMPLSSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTLLDVL 412
A VLG+I I+ + N+P+ +T P+ D +I+KF +P TLL
Sbjct: 284 AKVLGNIAIKILKGENPNNIPIINT------PIGNYKFDYE-IITKFDIPS---TLLPYK 333
Query: 411 AAFGDLTP*SYTVPRKMLLV 352
++F +L P SYT+P+ ++L+
Sbjct: 334 SSFINLKPLSYTIPKILVLL 353
>UniRef50_Q4PHN2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 392
Score = 37.5 bits (83), Expect = 0.27
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = -1
Query: 574 DQAHNHAVDFESQHAIVLYSFSGRYTFEYNKHGFKFLDIKVCGAARHGHITRCAGRVWRF 395
D H+ ++ +H+ V+Y+ +GR+ Y F F D+ V GA R I +G V RF
Sbjct: 120 DLRHDEQIEECVRHSDVVYNLTGRH---YETKNFTFNDVHVTGAQRIAQIAEASG-VGRF 175
Query: 394 NSIVVYGAQKNAVSA 350
+ A N+ SA
Sbjct: 176 IHVSHLNADANSPSA 190
>UniRef50_Q9C754 Cluster: Putative uncharacterized protein F12P21.9;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein F12P21.9 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 97
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Frame = +2
Query: 320 DIVKEGSNKVGTNSIFLGTVYDYGVKSP-------NAASTSSNVTMTRGTANFDIKEFKS 478
D +KE +VGT+SIF + + SP + +S S++ + T G F + E +
Sbjct: 31 DTIKEEEREVGTDSIFPSSFNSKKISSPFTSPYSSSVSSASASASCTSGLNKFPVTENRG 90
Query: 479 MFIVFK 496
F VFK
Sbjct: 91 SFPVFK 96
>UniRef50_Q23JY6 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3032
Score = 34.7 bits (76), Expect = 1.9
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Frame = +2
Query: 161 SPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYI-----AEKPLSIDDI 325
SP+ +S + + +KR + N ++ N +S Y + P +D+I
Sbjct: 1558 SPTELKSIQYYDGTNSKRTPSQTNYNQIGNYAQMTSRTNVSMQYQDGDIKGQSPYRLDEI 1617
Query: 326 VKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKG-- 499
SNK+GT+ Y +K + A + N + T NF E K I F+G
Sbjct: 1618 ----SNKLGTSEYKQENKYSMPLKRMDIADITYNKAIILKTKNFTTDEEKGRVIAFEGSH 1673
Query: 500 ITPTKT----VEDNGMLRFEVD 553
PT+ +E G+++ ++D
Sbjct: 1674 FLPTELDSNYLEKKGIIKKKID 1695
>UniRef50_Q5KP57 Cluster: ER organization and biogenesis-related
protein, putative; n=2; Filobasidiella neoformans|Rep:
ER organization and biogenesis-related protein, putative
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 836
Score = 34.7 bits (76), Expect = 1.9
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +2
Query: 125 TNALNLNSLTEASPSLGQSSESVESDENKRLNVKLN-NARVANLRIAHGDNKLSQMYIAE 301
T A ++N + A L ++++++E++E RL K N +A++AN + N L + +
Sbjct: 707 TPAADVNR-SAAVADLRKAAQALEAEEEARLFHKDNVDAKIANWKSGKETN-LRALIASL 764
Query: 302 KPLSIDDIVKEGSNKVGTNSI 364
+ DDIVKEG KVG + +
Sbjct: 765 DTVLWDDIVKEGGLKVGMHEL 785
>UniRef50_Q9PR00 Cluster: Uncharacterized protein UU144; n=1;
Ureaplasma parvum|Rep: Uncharacterized protein UU144 -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 243
Score = 34.7 bits (76), Expect = 1.9
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Frame = +2
Query: 206 NKRLNVKLNNARVANLRIAHGD-NKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVY 382
N+ +VKL N ++AN+ + + + N + Q +I+ + LS +DI K ++KV +G +
Sbjct: 13 NRDYDVKLTNVKIANIALNNDNVNNIEQNHISFRHLSTNDI-KNSNDKVEA-KFSIGLGF 70
Query: 383 DYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDN 529
D K N A + T DI + + + F + VE+N
Sbjct: 71 DISEKLKNIAFKKLD---TNTNKLIDISDPTILRLTFYEYNKDQKVENN 116
>UniRef50_A6KZV8 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 438
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +2
Query: 173 GQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVG 352
G S S++ +N ++ +KL AR + IA L + YI K S+DD++ N
Sbjct: 68 GSCSASLKMTDNAQIEMKLPPARYTIVAIAG----LGEEYIVPKDPSLDDVIVMKENNRS 123
Query: 353 TNSIFLGT 376
+ ++ +GT
Sbjct: 124 SRALMMGT 131
>UniRef50_A4YQ81 Cluster: Putative uncharacterized protein; n=1;
Bradyrhizobium sp. ORS278|Rep: Putative uncharacterized
protein - Bradyrhizobium sp. (strain ORS278)
Length = 4387
Score = 34.3 bits (75), Expect = 2.6
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +2
Query: 236 ARVANLRIAHGDNKLS-QMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYG--VKSPN 406
A+ L +A GD+ LS + + PLS+ + +G N VGT S V D G + +P
Sbjct: 2164 AQAGALFVASGDSSLSIKTGPSATPLSVQFVTSKGGNVVGTVSGAATAVADLGRVILAPG 2223
Query: 407 AASTSSNVTMTRGTAN 454
A T+ +TM +G+A+
Sbjct: 2224 ANITAKALTM-QGSAS 2238
>UniRef50_A0DBE4 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_44,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 1155
Score = 34.3 bits (75), Expect = 2.6
Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 2/146 (1%)
Frame = +2
Query: 128 NALNLNSLTEASPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKL-SQMYIAEK 304
N + N L E + + Q + +++ E +R KLNN NL+I + +NKL + Y +K
Sbjct: 544 NLIQQNKLQEQNVQIQQLTVQIQNMEEQRNEFKLNNQIFQNLKIKYVNNKLHNNQYPFKK 603
Query: 305 PL-SIDDIVKEGSNKVGTNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSM 481
+ + I S+K+ D + + +++ + +I +
Sbjct: 604 QIKNYKSIRPIQSSKISEIQALQSAHQDLNIANNKLIEENNSFQINHDQIAIEINNLQEQ 663
Query: 482 FIVFKGITPTKTVEDNGMLRFEVDSM 559
+ K T K E N L +++ +
Sbjct: 664 CRIEKE-TNQKISEQNQQLSSQIEQL 688
>UniRef50_Q3IDV8 Cluster: Putative flagellar hook-associated; n=2;
Alteromonadales|Rep: Putative flagellar hook-associated
- Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 670
Score = 33.5 bits (73), Expect = 4.5
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 200 DENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTV 379
+E + +KLN+ AN+ +A G + + +A + DDI GS + S+ T
Sbjct: 415 NEGDKFQIKLNSEAAANITLATGRGE--DLALASPIRTADDINNTGSGAISAGSVSSVTA 472
Query: 380 YDYGVKSPNA-ASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTV 520
+ +P A A+ + GT ++ I + + P K V
Sbjct: 473 GGFTTTTPPALANGDITIVKAAGTNDYLISDGNGANVPITIAPPGKNV 520
>UniRef50_Q96GC5 Cluster: 39S ribosomal protein L48, mitochondrial
precursor; n=25; Euteleostomi|Rep: 39S ribosomal protein
L48, mitochondrial precursor - Homo sapiens (Human)
Length = 212
Score = 33.5 bits (73), Expect = 4.5
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 221 VKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS 400
+ L+ +R + HG K + AE+P K+ KV +I LGT Y+YGV
Sbjct: 40 ILLSISRPYKTKPTHGIGKYKHLIKAEEP-------KKKKGKVEVRAINLGTDYEYGVL- 91
Query: 401 PNAASTSSNVTMTRGTANF--DIKEFKSMFIVFKGITPTKTVE 523
N T+ ++T+ A + ++ S+ + PTKT+E
Sbjct: 92 -NIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIE 133
>UniRef50_Q12753 Cluster: Transcriptional activator HAA1; n=2;
Saccharomyces cerevisiae|Rep: Transcriptional activator
HAA1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 694
Score = 33.5 bits (73), Expect = 4.5
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Frame = +2
Query: 179 SSESVESDENKRLNVKLNNARVANLRIAHGD--NKLSQMYIAEKPLSIDDIVKEGSNKVG 352
SS S+ + + RLN+ N V + H + +S + E + +++ + + VG
Sbjct: 238 SSVSLPAKADSRLNMMDKNNSVGLDLLGHSKRISPISNSRVGEVSVPLEEYIPSDIDGVG 297
Query: 353 TNSIFLGTVYDYGVKSPNAASTSSNVTMTRGTANFDIKEFKSMFIVFKGITPTKTVEDNG 532
+ VYD+ + S+ T G + FDI + I K + T ++ NG
Sbjct: 298 RVTDKSSLVYDWPFDESIERNFSTTATAATGESKFDIND-NCNRINSKSYSKTNSMNGNG 356
Query: 533 M 535
M
Sbjct: 357 M 357
>UniRef50_Q8IDD4 Cluster: Ser/Thr protein kinase; n=1; Plasmodium
falciparum 3D7|Rep: Ser/Thr protein kinase - Plasmodium
falciparum (isolate 3D7)
Length = 4044
Score = 33.1 bits (72), Expect = 5.9
Identities = 15/66 (22%), Positives = 33/66 (50%)
Frame = +2
Query: 161 SPSLGQSSESVESDENKRLNVKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGS 340
S S+ + +E K +N +NN++ + ++ +NK+ M + +S+ D++K
Sbjct: 3017 SNSINMKEKMSRINETKNINENINNSKNIS-EMSETNNKMDNMETRKNTISLQDVIKNNL 3075
Query: 341 NKVGTN 358
N + N
Sbjct: 3076 NNLQKN 3081
>UniRef50_Q8TZS7 Cluster: Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase; n=2; Pyrococcus|Rep:
Adenosylmethionine-8-amino-7-oxononanoate
aminotransferase - Pyrococcus furiosus
Length = 459
Score = 33.1 bits (72), Expect = 5.9
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +2
Query: 221 VKLNNARVANLRIAHGDNKLSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYDYGVKS 400
+ + +ARV+NL D+K + E ++I D+ K K IF D +
Sbjct: 313 INVKHARVSNLNAVIVDSKTIYFFTFEPFVTITDVDKNIGRK-----IFANKPIDLQIVL 367
Query: 401 PNAASTSSNVTMTRGTANFDIKEFKSMF 484
AA+ N T TR T F+ ++S++
Sbjct: 368 GKAAAKFVNATFTRDTMKFNGNIYRSIW 395
>UniRef50_Q1QUD7 Cluster: Response regulator receiver domain
protein; n=1; Chromohalobacter salexigens DSM 3043|Rep:
Response regulator receiver domain protein -
Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB13768)
Length = 678
Score = 32.7 bits (71), Expect = 7.8
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Frame = -2
Query: 570 KHTIMLSTSNRNMPLSSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAFGDLT 391
+H MLS + R + +S+ P + DL +++S V RVM TLLD A L
Sbjct: 76 QHLRMLSRATRRVLVSAATQTR--PARILTSDLPAVLSHDDVERVMTTLLDDYYAMDSLV 133
Query: 390 P*SYTVPRKM--LLVPTLLE----PSLTMSSIDSGFSAIYIWLNLLSP 265
+ +P M VP L P + G ++ W SP
Sbjct: 134 SRLFVMPEGMRAFSVPEPLHETALPPYQRDATPQGTDSVVWWPRASSP 181
>UniRef50_A0GZD5 Cluster: Putative uncharacterized protein; n=2;
Chloroflexus|Rep: Putative uncharacterized protein -
Chloroflexus aggregans DSM 9485
Length = 306
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = -2
Query: 576 SIKHTIMLSTSNRNMPLSSTVLVGVIPLNTINMDLNSLISKFAVPRVMVTLLDVLAAF 403
+I+ T + T + ++ + LVG L + N +L +L ++FA V TL LAAF
Sbjct: 65 AIRQTAAIDTYRMQLTINGSGLVGGFNLGSTNTELLALDARFAGADVSFTLRGFLAAF 122
>UniRef50_Q5BVU1 Cluster: SJCHGC06557 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC06557 protein - Schistosoma
japonicum (Blood fluke)
Length = 228
Score = 32.7 bits (71), Expect = 7.8
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +2
Query: 209 KRLNVKLNNARVANLRIAHGDNK-LSQMYIAEKPLSIDDIVKEGSNKVGTNSIFLGTVYD 385
+RLNVKLNN + + I GD + + ++ IA V + + K+ TN+ + V D
Sbjct: 82 RRLNVKLNNIQPED--IMEGDKETVHELLIAINDYFTPKAVNKSTKKLFTNNNHIHDV-D 138
Query: 386 YGVKSPNAASTSSNV-TMTRGT 448
Y + S S SN+ T TR T
Sbjct: 139 YKLDSNGRTSAWSNMSTSTRRT 160
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 649,000,649
Number of Sequences: 1657284
Number of extensions: 12893733
Number of successful extensions: 36535
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 35269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36520
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -