Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6a09
         (571 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            30   0.061
L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione S-transf...    24   3.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   5.3  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             23   7.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.0  

>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 29.9 bits (64), Expect = 0.061
 Identities = 13/41 (31%), Positives = 28/41 (68%)
 Frame = -2

Query: 417 KIVKITKNSFSVIKMRHLKHFINLTL*TLENHRIQVVNRAA 295
           ++++++ NS   +  R L+H  NL L TL +++++ ++RAA
Sbjct: 209 RVLELSFNSLEELDPRLLRHLPNLRLLTLWHNKLRTLSRAA 249


>L07880-1|AAA29358.1|  218|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 218

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
 Frame = -2

Query: 561 LQVLCLIKSFRESHLHIISYTF---DLVSEKKHTTLNN 457
           LQ+  ++ +  +  L I    +   D+V EKK  TLNN
Sbjct: 101 LQIDAIVDTINDFRLKIAIVAYEPDDMVKEKKMVTLNN 138


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -2

Query: 441 SFPYSYFCKIVKITKNSFSVIK-MRH 367
           S P+SY  K++++ K   +VIK M+H
Sbjct: 613 SVPHSYLLKVLQLYKVDGNVIKLMQH 638


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = -3

Query: 197  NARVDEAYSRDANFSEANWRTRVPHYPPLYDSDPNGTPTQSV 72
            N + D      AN      +TRVPH  P   S    TP + V
Sbjct: 972  NVKADSTRFVTANLPCNKHKTRVPHILPYESSRVCLTPIRGV 1013


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -3

Query: 125 HY-PPLYDSDPNGTPTQSVP 69
           HY PPL   DP G P + +P
Sbjct: 33  HYLPPLECVDPYGRPQRCIP 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,630
Number of Sequences: 2352
Number of extensions: 11028
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)