Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6a09
         (571 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 prote...    30   1.9  
AY071135-1|AAL48757.1|  220|Drosophila melanogaster RE17678p pro...    30   2.5  
AE014297-3968|AAF56601.1|  220|Drosophila melanogaster CG14240-P...    30   2.5  
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro...    29   5.8  
AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protei...    29   5.8  
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei...    29   5.8  
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB...    29   5.8  
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD...    29   5.8  
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA...    29   5.8  

>AJ309005-1|CAC35209.1| 2382|Drosophila melanogaster GRAAL2 protein
            protein.
          Length = 2382

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/55 (32%), Positives = 26/55 (47%)
 Frame = -1

Query: 178  HIRETLIFQRRTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
            H RET     RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 1638 HARET----SRTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 1688


>AY071135-1|AAL48757.1|  220|Drosophila melanogaster RE17678p
           protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 302 AQQNNESDDEHRKLSAQQVNGSGANAAHWCTSWRENARVDEAYSRDANFSEANWRTRVPH 123
           AQ+  +S  +    S+Q +NG  ANA ++ +     ARV       +N+  AN  +R+ H
Sbjct: 161 AQRAIQSQYDQLGGSSQSINGGVANAINFASQGAAPARVTPQQVPQSNYLPANILSRLRH 220


>AE014297-3968|AAF56601.1|  220|Drosophila melanogaster CG14240-PA
           protein.
          Length = 220

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 18/60 (30%), Positives = 30/60 (50%)
 Frame = -3

Query: 302 AQQNNESDDEHRKLSAQQVNGSGANAAHWCTSWRENARVDEAYSRDANFSEANWRTRVPH 123
           AQ+  +S  +    S+Q +NG  ANA ++ +     ARV       +N+  AN  +R+ H
Sbjct: 161 AQRAIQSQYDQLGGSSQSINGGVANAINFASQGAAPARVTPQQVPQSNYLPANILSRLRH 220


>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p protein.
          Length = 2409

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 148  RTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
            RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 1671 RTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 1715


>AJ251803-1|CAB64653.1| 1449|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1449

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 148 RTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
           RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 711 RTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 755


>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1462

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 148 RTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
           RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 724 RTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 768


>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
           isoform B protein.
          Length = 1374

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 148 RTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
           RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 636 RTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 680


>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
           isoform D protein.
          Length = 1450

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 148 RTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
           RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 712 RTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 756


>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
            isoform A protein.
          Length = 2786

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -1

Query: 148  RTGERVSPTTHHCMTVTQMERRRSQFRERSLVCTTSMRAYSATGH 14
            RT + + P+T +  T  Q   RR++    +L  TT    + A GH
Sbjct: 2048 RTEQTLDPSTTYASTNFQRSTRRAELDPDTLTATTMKTNWHAPGH 2092


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,858,809
Number of Sequences: 53049
Number of extensions: 448244
Number of successful extensions: 1265
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)