Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc6a04
(407 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 23 1.2
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 2.0
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 3.5
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 4.6
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 4.6
AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembran... 21 4.6
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 21 4.6
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 20 8.1
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 20 8.1
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 23.0 bits (47), Expect = 1.2
Identities = 7/14 (50%), Positives = 12/14 (85%)
Frame = -2
Query: 397 KDLSFYFQIIYTIV 356
+DLS YF +IY+++
Sbjct: 17 RDLSLYFSVIYSLL 30
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 22.2 bits (45), Expect = 2.0
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +2
Query: 302 KTFCCGVQNSSPTKHDHLNNCVYY 373
KT C G + SP + + ++ VY+
Sbjct: 302 KTLCNGSKGISPEQEELIHRLVYF 325
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.4 bits (43), Expect = 3.5
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 19 NRCYGRSRNLFRLWTFKMCV 78
N YG LF L TF +C+
Sbjct: 229 NSIYGFQNFLFVLSTFSICI 248
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 322 NSAAKGFQGSCMS*IVTKIG 263
NSA +GF G+ + +V K G
Sbjct: 94 NSADEGFDGTFQTNVVVKHG 113
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 322 NSAAKGFQGSCMS*IVTKIG 263
NSA +GF G+ + +V K G
Sbjct: 94 NSADEGFDGTFQTNVVVKHG 113
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.6
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 322 NSAAKGFQGSCMS*IVTK-IGECFSV 248
NSA +GF G+ + +V K G C V
Sbjct: 94 NSADEGFDGTFQTNVVVKHNGSCLYV 119
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.6
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -2
Query: 322 NSAAKGFQGSCMS*IVTK-IGECFSV 248
NSA +GF G+ + +V K G C V
Sbjct: 94 NSADEGFDGTFQTNVVVKHNGSCLYV 119
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 4.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -2
Query: 322 NSAAKGFQGSCMS*IVTKIG 263
NSA +GF G+ + +V K G
Sbjct: 94 NSADEGFDGTFQTNVVVKHG 113
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.0 bits (42), Expect = 4.6
Identities = 12/38 (31%), Positives = 13/38 (34%)
Frame = +2
Query: 35 DRGIYLDYGHLKCAYCNDFSSNSREACDSVLKREHTNC 148
DR YG C C F + S RE NC
Sbjct: 91 DRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKNC 128
>AF442747-1|AAL40947.1| 669|Tribolium castaneum ABC transmembrane
transporter protein.
Length = 669
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 191 YFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGT 298
+F+ +KR S ++ H + +AY G L G+
Sbjct: 77 FFNLIKRKDSPVQKKHILKNVFGVAYPGELLAILGS 112
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 21.0 bits (42), Expect = 4.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +2
Query: 191 YFDYVKRLQSLLKSHHFRNDAKTLAYFGYYLTHTGT 298
+F+ +KR S ++ H + +AY G L G+
Sbjct: 77 FFNLIKRKDSPVQKKHILKNVFGVAYPGELLAILGS 112
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 20.2 bits (40), Expect = 8.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 126 KTESHASRLFELKSLQYAHFK 64
KT+S R L SLQ AH K
Sbjct: 321 KTDSMLIRNINLFSLQLAHQK 341
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 20.2 bits (40), Expect = 8.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 126 KTESHASRLFELKSLQYAHFK 64
KT+S R L SLQ AH K
Sbjct: 146 KTDSMLIRNINLFSLQLAHQK 166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,217
Number of Sequences: 336
Number of extensions: 1855
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8857716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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