Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc6a04
         (407 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.1  
AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase p...    24   2.5  
AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase...    24   2.5  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   4.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   5.7  

>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -1

Query: 395 RFIILFPNNIHNCLNDRVWWATSFELRSKR 306
           RF+++   ++ N  N   W A +  LR+KR
Sbjct: 562 RFLLVAALDVRNAFNTASWQAIATALRTKR 591


>AJ010195-1|CAA09034.1|  687|Anopheles gambiae prophenoloxidase
           protein.
          Length = 687

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 107 PDCLS*NR--YSTHILNVHNLNRFRDRP*HRFLDHY 6
           P  LS N   Y  +  ++HNL  F   P +RFL+ Y
Sbjct: 351 PSALSVNSQYYGNYHGHMHNLISFSHDPENRFLEGY 386


>AF004916-1|AAB94672.1|  686|Anopheles gambiae pro-phenol oxidase
           subunit 2 protein.
          Length = 686

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = -1

Query: 107 PDCLS*NR--YSTHILNVHNLNRFRDRP*HRFLDHY 6
           P  LS N   Y  +  N+HN+  +   P +RFL+ Y
Sbjct: 350 PSALSVNSQFYGNYHGNLHNIIAYSHDPDNRFLEGY 385


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.0 bits (47), Expect = 4.3
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = -1

Query: 128 LKQNRTLPDCLS*NRYSTHILNVHNLNRFRDRP*HRFLDH 9
           L+  +   DCL   RY   +L V+   +  D P  R L H
Sbjct: 153 LQATQAALDCLVMLRYPEKLLKVYASGKVEDSPETRCLYH 192


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 10/41 (24%), Positives = 18/41 (43%)
 Frame = -1

Query: 395 RFIILFPNNIHNCLNDRVWWATSFELRSKRFSGFLYELNSN 273
           RF  +   ++ N  N   W A +  L+      +LY++  N
Sbjct: 546 RFCAVVTLDVKNAFNSASWTAIARSLQRINIPKYLYDIIGN 586


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 403,489
Number of Sequences: 2352
Number of extensions: 7481
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32922351
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)