Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5p23
         (712 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.1  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.1  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   3.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.9  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.9  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   9.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.9  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 266 FGNSYYPQLQLISLYKLHRYLFHKSLHDLPP 174
           +GN Y+PQL       +H  +    LHD  P
Sbjct: 81  YGNYYHPQLHSHHGPPIHHQIRPPILHDTQP 111


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 266 FGNSYYPQLQLISLYKLHRYLFHKSLHDLPP 174
           +GN Y+PQL       +H  +    LHD  P
Sbjct: 81  YGNYYHPQLHSHHGPPIHHQIRPPILHDTQP 111


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 266 FGNSYYPQLQLISLYKLHRYLFHKSLHDLPP 174
           +GN Y+PQL       +H  +    LHD  P
Sbjct: 81  YGNYYHPQLHSHHGPPIHHQIRPPILHDTQP 111


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 266 FGNSYYPQLQLISLYKLHRYLFHKSLHDLPP 174
           +GN Y+PQL       +H  +    LHD  P
Sbjct: 81  YGNYYHPQLHSHHGPPIHHQIRPPILHDTQP 111


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 539 LNASVEMVLTHLASLHDGPHLFHL 468
           L   VEMVL      +D  H FHL
Sbjct: 513 LGTVVEMVLIDKGYAYDANHPFHL 536


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 YELPNDSRNSHIQRWPSCTAR 315
           YEL    R  H+Q +P  ++R
Sbjct: 529 YELARRERQLHMQLYPDWSSR 549


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 253 YELPNDSRNSHIQRWPSCTAR 315
           YEL    R  H+Q +P  ++R
Sbjct: 421 YELARRERQLHMQLYPDWSSR 441


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 168 STLIGTPIDMFTF 130
           STL GTP+D + F
Sbjct: 145 STLTGTPVDGWLF 157


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 275 RESFGNSYYPQLQLISLYKLHRYLF 201
           +ES  N Y   LQL+ ++    YLF
Sbjct: 130 KESERNDYVSLLQLVFVFCYFIYLF 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,232
Number of Sequences: 336
Number of extensions: 3335
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)