Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5p14
(665 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 101 3e-22
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 101 3e-22
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 47 1e-05
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 36 0.020
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 36 0.020
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.18
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 33 0.18
U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical pr... 32 0.32
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 3.0
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 29 3.9
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 29 3.9
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 28 5.2
AC025726-26|AAK73933.2| 129|Caenorhabditis elegans Hypothetical... 28 6.8
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 27 9.1
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 101 bits (243), Expect = 3e-22
Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Frame = +2
Query: 230 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 373
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 1 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 60
Query: 374 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 553
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 61 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSER------DPCEVRML 113
Query: 554 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
+HQS AG +IG+ GSKIKELREK ARLKIF+ AP
Sbjct: 114 VHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAP 149
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 101 bits (243), Expect = 3e-22
Identities = 64/156 (41%), Positives = 89/156 (57%), Gaps = 12/156 (7%)
Frame = +2
Query: 230 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 373
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 374 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 553
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 78 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSER------DPCEVRML 130
Query: 554 IHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
+HQS AG +IG+ GSKIKELREK ARLKIF+ AP
Sbjct: 131 VHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAP 166
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Frame = +2
Query: 365 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 535
+R + A I + D PER+++IT TL I K +F + +
Sbjct: 97 IREESGAKINISDGSCPERIVTITG----TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPP 152
Query: 536 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
+ +R+++ ++ G +IGK GSKIK++RE TGA +++ S P
Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLP 194
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 536 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAPQ 664
L +R+L+ G +IGK G +IK++RE++GA++ I S P+
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDGSCPE 114
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Frame = +2
Query: 212 TLLGIKMKRDAYGDDGPAQKR-HRQTDDE------VTFLIPSKVAXXXXXXXXXXXXXLR 370
T G+K +DA DGPA K+ H ++E + LIPS L+
Sbjct: 11 TQQGVKRTQDA--SDGPANKKAHFGGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLK 68
Query: 371 SQYKASITVPD----CPGPERVLSITAEDDETLVEIIKDIMPCLAE-FHNQGGSRMGDQE 535
+ + + PG + + ++ +I+ I + E +QGGS D +
Sbjct: 69 NDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMAVIESIQDKIREKCADQGGSDAFDHK 128
Query: 536 -----LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIF 646
++++++ + AG VIGK+G+ IK++RE+ G +++++
Sbjct: 129 NTSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQIQVY 170
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 509 GGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNS 655
GG G L +++LI + G +IGK G ++ L+ R+++ NS
Sbjct: 33 GGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNS 81
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 542 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
+RM H G +IGKAGS IKE+ +KTG + +
Sbjct: 277 LRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNITV 310
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 542 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
VRM + S G +IG G IK + TGA +KI
Sbjct: 419 VRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 452
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +2
Query: 407 PGPERVLSITAEDDETLVE---IIKDIMPCLAEFHNQG--GSRMGDQELDVRMLIHQSRA 571
P ER+++I +D + L + I + + G G R + + +
Sbjct: 510 PVSERMVTINGDDLQLLKAQSYVFSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRII 569
Query: 572 GCVIGKAGSKIKELREKTGARLKI 643
G +IGK G ++EL+ TGA +KI
Sbjct: 570 GRIIGKGGQNVRELQRITGAVVKI 593
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 37.9 bits (84), Expect = 0.006
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 542 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
+RM H G +IGKAGS IKE+ +KTG + +
Sbjct: 401 LRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNITV 434
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 542 VRMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
VRM + S G +IG G IK + TGA +KI
Sbjct: 543 VRMWVPDSMIGALIGAKGKNIKMIIRDTGASVKI 576
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Frame = +2
Query: 407 PGPERVLSITAEDDETLVE---IIKDIMPCLAEFHNQG--GSRMGDQELDVRMLIHQSRA 571
P ER+++I +D + L + I + + G G R + + +
Sbjct: 634 PVSERMVTINGDDLQLLKAQSYVFSKIAETSSSLPSSGMDGDRSHMLRIRTEVSVPTRII 693
Query: 572 GCVIGKAGSKIKELREKTGARLKI 643
G +IGK G ++EL+ TGA +KI
Sbjct: 694 GRIIGKGGQNVRELQRITGAVVKI 717
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 36.3 bits (80), Expect = 0.020
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 398 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 565
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 44 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 101
Query: 566 RAGCVIGKAGSKIKELREKTGARL 637
R G +IGK+G I++L+EK+G ++
Sbjct: 102 RCGLIIGKSGDTIRQLQEKSGCKM 125
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 494 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
+ H+ GG G +++ +S G +IGK G IK L +TG +++ + P
Sbjct: 174 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDP 227
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.020
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 398 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 565
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 107 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 164
Query: 566 RAGCVIGKAGSKIKELREKTGARL 637
R G +IGK+G I++L+EK+G ++
Sbjct: 165 RCGLIIGKSGDTIRQLQEKSGCKM 188
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 494 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
+ H+ GG G +++ +S G +IGK G IK L +TG +++ + P
Sbjct: 237 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDP 290
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 36.3 bits (80), Expect = 0.020
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +2
Query: 398 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 565
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 85 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 142
Query: 566 RAGCVIGKAGSKIKELREKTGARL 637
R G +IGK+G I++L+EK+G ++
Sbjct: 143 RCGLIIGKSGDTIRQLQEKSGCKM 166
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 494 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
+ H+ GG G +++ +S G +IGK G IK L +TG +++ + P
Sbjct: 215 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDP 268
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 506 QGGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
Q G G QE + +++ + AG +IGK G IK L +TG +++ ++ P
Sbjct: 181 QFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNP 234
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 503 NQGGSRMGDQ--ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGAR 634
NQ G++ G E+ MLI + G VIGK G I+ ++E++G R
Sbjct: 78 NQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLR 123
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 548 MLIHQSRAGCVIGKAGSKIKELREKTGA 631
M + + G VIGK G IK++ +TGA
Sbjct: 289 MHVPAGKCGLVIGKGGENIKQIERETGA 316
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 506 QGGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELREKTGARLKIFSNSAP 661
Q G G QE + +++ + AG +IGK G IK L +TG +++ ++ P
Sbjct: 228 QFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNP 281
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +2
Query: 503 NQGGSRMGDQ--ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGAR 634
NQ G++ G E+ MLI + G VIGK G I+ ++E++G R
Sbjct: 125 NQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLR 170
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 548 MLIHQSRAGCVIGKAGSKIKELREKTGA 631
M + + G VIGK G IK++ +TGA
Sbjct: 336 MHVPAGKCGLVIGKGGENIKQIERETGA 363
>U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical
protein F26B1.2e protein.
Length = 93
Score = 32.3 bits (70), Expect = 0.32
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Frame = +2
Query: 230 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 373
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 374 QYKASITVPDCPGPER 421
++ A + VPD PER
Sbjct: 78 EFNAHVQVPDSNTPER 93
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2
Query: 548 MLIHQSRAGCVIGKAGSKIKELREKTGA 631
MLI S+ G VIG+ G I+++ +++GA
Sbjct: 415 MLIPASKCGLVIGRGGETIRQINKESGA 442
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 545 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
++ I A VIGK GS + +RE TGA ++I
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 545 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
++ I A VIGK GS + +RE TGA ++I
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 545 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
++ I A VIGK GS + +RE TGA ++I
Sbjct: 618 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 650
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 545 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
++ I A VIGK GS + +RE TGA ++I
Sbjct: 618 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 650
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 545 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
++ I A VIGK GS + +RE TGA ++I
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 545 RMLIHQSRAGCVIGKAGSKIKELREKTGARLKI 643
++ I A VIGK GS + +RE TGA ++I
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEI 1829
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 221 PIKFRAPTVTLDHTFIDRLKDTKALKHKQYTFRYKNLVKSKLDLNIKTLKMAAT 60
PI + V L HT + L+ + QY Y L K K++++AAT
Sbjct: 1787 PISKKTMKVDLSHTELSHLRKGRMTTESQYAHDYGILTDKKHVNRFKSVRVAAT 1840
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 221 PIKFRAPTVTLDHTFIDRLKDTKALKHKQYTFRYKNLVKSKLDLNIKTLKMAAT 60
PI + V L HT + L+ + QY Y L K K++++AAT
Sbjct: 1787 PISKKTMKVDLSHTELSHLRKGRMTTESQYAHDYGILTDKKHVNRFKSVRVAAT 1840
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 460 HERFVIFSCYGEYPFGAG-AIWDCYRGFVLASEL 362
++RFV C G YP G A W C +G+++ L
Sbjct: 304 NKRFV--KCAGPYPMFRGEAAWSCIQGYIVMKRL 335
>AC025726-26|AAK73933.2| 129|Caenorhabditis elegans Hypothetical
protein Y71G12B.7 protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2
Query: 469 NDFHERFVIFSCYGEYPFGAGAIW 398
N H R IF C+GE+ F IW
Sbjct: 94 NCIHSRLSIFFCFGEFMFILKLIW 117
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 456 SWKSLKISCRAWQNFITRVD 515
SW S +I + WQN++ VD
Sbjct: 151 SWLSKRIEIKKWQNYLVEVD 170
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,798,357
Number of Sequences: 27780
Number of extensions: 303415
Number of successful extensions: 822
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 815
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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