Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5p11
         (171 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0UJM7 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_Q7RQ81 Cluster: Putative uncharacterized protein PY0122...    31   6.7  

>UniRef50_Q0UJM7 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 199

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = +3

Query: 69  FPHCGTSILN*FLLNDGKFGARSTPVTGRP 158
           +PHCGT+ LN  +LN GK  ++ T  T  P
Sbjct: 17  WPHCGTAALNDTILNTGKGSSQMTASTWTP 46


>UniRef50_Q7RQ81 Cluster: Putative uncharacterized protein
          PY01221; n=1; Plasmodium yoelii yoelii|Rep: Putative
          uncharacterized protein PY01221 - Plasmodium yoelii
          yoelii
          Length = 29

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +3

Query: 6  FSAFWLRSKCSICSFQ 53
          FSA WLRS CS CS+Q
Sbjct: 11 FSASWLRSICSTCSYQ 26


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,086,495
Number of Sequences: 1657284
Number of extensions: 2539138
Number of successful extensions: 4295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4295
length of database: 575,637,011
effective HSP length: 36
effective length of database: 515,974,787
effective search space used: 10319495740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)