Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5o14
(471 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 49 2e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 4e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 45 4e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 44 6e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 1e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 1e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 1e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 43 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 42 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 42 3e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 1e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 38 5e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 37 9e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.41
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.2
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 3.8
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 6.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 8.8
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 8.8
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 8.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 49.2 bits (112), Expect = 2e-08
Identities = 40/129 (31%), Positives = 57/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 92 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 250
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 251 VRIQADLQMNWIDKRLSWNAXEWGCSTWLX-SSERLWRPDVVLLNAAATTAGDYAL-RAR 424
+ L+ W D + W+ E+G T L SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 425 VSNNGSVSW 451
+ G V W
Sbjct: 127 LHYTGKVLW 135
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.6 bits (103), Expect = 3e-07
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 110 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 274
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 275 MNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVL 376
+ W L+W + E+ ++ S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 401 GDYALRARVSNNGS 442
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 3e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 401 GDYALRARVSNNGS 442
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 45.6 bits (103), Expect = 3e-07
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 9/123 (7%)
Frame = +2
Query: 110 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 268
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 269 LQMNWIDKRLSWNAXEWGCSTWLX-SSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 442
++ +W D +L W+ E+G L S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 443 VSW 451
V W
Sbjct: 137 VEW 139
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.2 bits (102), Expect = 4e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 401 GDYALRARVSNNGS 442
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 45.2 bits (102), Expect = 4e-07
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 12/136 (8%)
Frame = +2
Query: 80 LTCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRE 238
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 239 SESTVRIQADLQMNWIDKRLSWNAXEWG-CSTWLXSSERLWRPDVVLLNAAATTAGDYAL 415
T + ++ W D +L WN ++G T SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 416 ----RARVSNNGSVSW 451
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 44.4 bits (100), Expect = 6e-07
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Frame = +2
Query: 137 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 295
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 296 LSWNAXEWGCSTWLX-SSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 451
L WN E+G L SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 401 GDYALRARVSNNGS 442
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 401 GDYALRARVSNNGS 442
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 401 GDYALRARVSNNGS 442
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 401 GDYALRARVSNNGS 442
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.2 bits (97), Expect = 1e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAA-ATTA 400
++ E + A L++ W+D L WN E+ G + +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 401 GDYALRARVSNNGS 442
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 1e-06
Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 301
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 302 WNAXEWGCSTWLX-SSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 451
W E+G L S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 41.9 bits (94), Expect = 3e-06
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 116 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 283
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 284 IDKRLSWNAXEWGCSTWLXSSERLWRPDVVLLN 382
+D+RL++ + + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.9 bits (94), Expect = 3e-06
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = +2
Query: 188 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWR 361
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 362 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 451
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 41.9 bits (94), Expect = 3e-06
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 7/125 (5%)
Frame = +2
Query: 89 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 253
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 254 RIQADLQMNWIDKRLSWNAXEWGCSTWLX-SSERLWRPDVVLLNAA-ATTAGDYALRARV 427
L++ W D + WN ++G L RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 428 SNNGS 442
NNG+
Sbjct: 131 KNNGT 135
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 4e-06
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +2
Query: 191 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAXEW-GCSTWLXSSERLWRPD 367
+V L+LH ++ E + + W D L WNA E+ G R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 368 VVLLNAAATTAGDYALRAR--VSNNGSVSW 451
+L N A + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 40.3 bits (90), Expect = 1e-05
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 301
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 302 WNAXEWGCSTWLX-SSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 451
W E+G L S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 37.9 bits (84), Expect = 5e-05
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Frame = +2
Query: 125 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 289
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 290 KRLSWNAXEWGCSTWLXSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWXKR 460
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 461 LDI 469
L I
Sbjct: 156 LTI 158
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 37.1 bits (82), Expect = 9e-05
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 11/148 (7%)
Frame = +2
Query: 59 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTLHLR 220
++LL FLL + + + ++D++L YD P D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 221 H-ANIRESESTVRIQADLQMNWIDKRLSWNAXEWGCS-TWLXSSERLWRPDVVLLNAAAT 394
A I + + +Q + W+D+RL +N L + R+W PD+ N
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLTLTDASRVWMPDLFFSNEKEG 128
Query: 395 TAGDYAL---RARVSNNGSVSWXKRLDI 469
+ + R+ NGSV + R+ +
Sbjct: 129 HFHNIIMPNVYIRIFPNGSVLYSIRISL 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.5 bits (78), Expect = 3e-04
Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 8/120 (6%)
Frame = +2
Query: 113 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 280
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 281 WIDKRLSWNAXEW-GCSTWLXSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 448
W D LSW ++ G + S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.41
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 56 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 160
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 2.2
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -3
Query: 334 PSAAAPLPCVPTQS 293
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 21.8 bits (44), Expect = 3.8
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
Frame = +2
Query: 191 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLSWN--AXEWGCSTWLXSSE---R 352
++V+ + + N I + R+ ++ +WI+ RL E G E
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 353 LWRPDVVLLNA 385
LW+PD LNA
Sbjct: 71 LWQPDPYFLNA 81
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 21.0 bits (42), Expect = 6.7
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 347 ERLWRPDVVLLNAAATT 397
+ +WRPD NA + T
Sbjct: 116 KNMWRPDSFFKNAKSVT 132
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 410 ALRARVSNNGSVSWXK 457
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 410 ALRARVSNNGSVSWXK 457
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 20.6 bits (41), Expect = 8.8
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +2
Query: 410 ALRARVSNNGSVSWXK 457
ALR N G ++W K
Sbjct: 240 ALRCLAHNGGEIAWTK 255
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,740
Number of Sequences: 438
Number of extensions: 2652
Number of successful extensions: 46
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12682287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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