Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5o04
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TR... 92 1e-17
UniRef50_Q93138 Cluster: ORF1; n=1; Bombyx mori|Rep: ORF1 - Bomb... 86 7e-16
UniRef50_UPI00015BAFEA Cluster: hypothetical protein Igni_0437; ... 40 0.080
UniRef50_A5W9C8 Cluster: Putative uncharacterized protein; n=2; ... 39 0.14
UniRef50_A5B2M8 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_Q5NTZ1 Cluster: Non-LTR retrotransposon R1Bmks ORF1 pro... 38 0.25
UniRef50_Q53WB7 Cluster: Repeat motif-containing protein; n=4; T... 37 0.43
UniRef50_UPI00015B5D3A Cluster: PREDICTED: similar to conserved ... 37 0.57
UniRef50_Q25662 Cluster: Repeat organellar protein; n=5; Plasmod... 37 0.57
UniRef50_A2DWI6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.57
UniRef50_Q2JUM5 Cluster: Putative uncharacterized protein; n=2; ... 36 0.75
UniRef50_Q583I7 Cluster: Putative uncharacterized protein; n=2; ... 36 0.75
UniRef50_Q22C20 Cluster: Helicase conserved C-terminal domain co... 36 0.75
UniRef50_UPI000049A29E Cluster: Viral A-type inclusion protein r... 36 0.99
UniRef50_Q3IKW1 Cluster: Putative uncharacterized protein; n=1; ... 35 1.7
UniRef50_A7PRD8 Cluster: Chromosome chr14 scaffold_26, whole gen... 35 2.3
UniRef50_A5UQK5 Cluster: Sensor protein; n=2; Roseiflexus|Rep: S... 34 3.0
UniRef50_UPI0000D66813 Cluster: PREDICTED: similar to KIAA1858 p... 34 4.0
UniRef50_Q7WNX2 Cluster: Type III restriction enzyme; n=3; Bacte... 34 4.0
UniRef50_Q5TWL3 Cluster: ENSANGP00000028554; n=1; Anopheles gamb... 33 5.3
UniRef50_P32563 Cluster: Vacuolar ATP synthase subunit a, vacuol... 33 5.3
UniRef50_UPI00006CC373 Cluster: hypothetical protein TTHERM_0058... 33 7.0
UniRef50_UPI00006601FF Cluster: Homolog of Homo sapiens "Splice ... 33 9.2
UniRef50_Q31A53 Cluster: Leukotoxin secretion protein-like prote... 33 9.2
UniRef50_Q1PYQ3 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_Q1PV44 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_A4U2K5 Cluster: Methyl-accepting chemotaxis protein; n=... 33 9.2
UniRef50_A3K610 Cluster: Probable chemoreceptor (Methyl-acceptin... 33 9.2
UniRef50_Q28ZP1 Cluster: GA14121-PA; n=1; Drosophila pseudoobscu... 33 9.2
UniRef50_A0JMQ7 Cluster: Mitochondrial tumor suppressor 1 homolo... 33 9.2
>UniRef50_Q9BLI5 Cluster: TRAS3 protein; n=7; Bombycoidea|Rep: TRAS3
protein - Bombyx mori (Silk moth)
Length = 1682
Score = 92.3 bits (219), Expect = 1e-17
Identities = 45/116 (38%), Positives = 75/116 (64%)
Frame = +1
Query: 343 RPALHSMAVTLEGSQETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERK 522
R LHS+ +T + ET ++VL RV++AVDA+ +++ VRKAK++ +I+G T+ ER
Sbjct: 202 RQTLHSVVITSKDECETGEKVLDRVRKAVDAKEGWIEVKNVRKAKDRKVIIGLGTKAERD 261
Query: 523 KVQEIIESRGDGLVVAPMKNKSPLVVLKDVFVESEDDDMIKALHVQNKNIFMGLPE 690
K++ +E L V ++N+ PL++L+ V D+D++KAL QN++IF L E
Sbjct: 262 KLKNRLEKAETQLHVEEVENRDPLMMLRSVLTIHSDEDILKALRNQNRDIFRDLCE 317
>UniRef50_Q93138 Cluster: ORF1; n=1; Bombyx mori|Rep: ORF1 - Bombyx
mori (Silk moth)
Length = 460
Score = 86.2 bits (204), Expect = 7e-16
Identities = 43/121 (35%), Positives = 72/121 (59%)
Frame = +1
Query: 352 LHSMAVTLEGSQETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQ 531
LHS+ V+ + ET D +L +++ +++ +VRK K++ II+ TEEER K
Sbjct: 210 LHSIMVSSKDENETGDGILTELRKTASEDEGWVRVERVRKIKDRKIIMSYRTEEERTKAT 269
Query: 532 EIIESRGDGLVVAPMKNKSPLVVLKDVFVESEDDDMIKALHVQNKNIFMGLPEEDMPMEI 711
+ ++ LVV +KNK PL++L +V D+D+ KAL +NK++F L +ED +E+
Sbjct: 270 QRLKKSEGELVVEEIKNKDPLLILYNVLKMHSDEDLQKALRSKNKDLFRNLNKEDDRIEV 329
Query: 712 K 714
K
Sbjct: 330 K 330
>UniRef50_UPI00015BAFEA Cluster: hypothetical protein Igni_0437;
n=1; Ignicoccus hospitalis KIN4/I|Rep: hypothetical
protein Igni_0437 - Ignicoccus hospitalis KIN4/I
Length = 219
Score = 39.5 bits (88), Expect = 0.080
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLN-------DENDGRGSDMIDKIIDRIDETRAAMDQT 162
EVEK L KR++E+E L + I + N +E + + D+ +++ +RIDET +DQ
Sbjct: 96 EVEKRLDKRIDEVEKRLNSRIDETNKRIDEVKEELNRKIEDVRNELNNRIDETNRKIDQL 155
Query: 163 TE---AVESRTHALVKDLVGGLADDVVAAKQELTEVAKGLA 276
E +E R + + +L L+ + +Q + E+ G+A
Sbjct: 156 WEEMKLMEGRLNKRIDELKEELSKRMDDIEQSMDELKAGMA 196
>UniRef50_A5W9C8 Cluster: Putative uncharacterized protein; n=2;
Gammaproteobacteria|Rep: Putative uncharacterized
protein - Pseudomonas putida F1
Length = 730
Score = 38.7 bits (86), Expect = 0.14
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +1
Query: 10 EKALTKRLNEMELSLKTDIIQLNDENDGR--GS-----DMIDKIIDRIDETRAAMDQTTE 168
++A+ + L S+K I Q E + GS + + + ++++ + MDQ+T
Sbjct: 446 QQAMAENLQAFVESIKQSIGQGQQETMAKIAGSVEVLGEQLSAVFKQLEQGQQQMDQSTR 505
Query: 169 AVESRTHALVKDLVGGLADDVVAAKQELTEVAKGLACDIN 288
A ++ H ++LVGGL + V A Q ++E K +N
Sbjct: 506 AAQADLHQGTRELVGGLDEQVKALLQTVSEQQKSAQDTVN 545
>UniRef50_A5B2M8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 983
Score = 38.3 bits (85), Expect = 0.19
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESR 183
+ EK ++K L +E+ D + LN DGR D++DK ++ ++AA + +T+ +
Sbjct: 367 KAEKTMSKELESLEMGAIEDSVALNT-GDGRNEDLVDKACEQSITSQAAQNVSTDTNDRE 425
Query: 184 THAL 195
A+
Sbjct: 426 AKAM 429
>UniRef50_Q5NTZ1 Cluster: Non-LTR retrotransposon R1Bmks ORF1
protein; n=2; Bombyx mori|Rep: Non-LTR retrotransposon
R1Bmks ORF1 protein - Bombyx mori (Silk moth)
Length = 458
Score = 37.9 bits (84), Expect = 0.25
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Frame = +1
Query: 376 EGSQE--TADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESR 549
EG+ E TA++ VK+A+D + + I VRK N +++ + K++ +
Sbjct: 220 EGNAELKTAEDTKKEVKKAIDPKSMAIGIQSVRKVGNAGVVVQTTSPAAAVKLRNAVP-- 277
Query: 550 GDGLVVAPMKNKSPLVVLKDVFVESEDDDMIKALHVQN 663
L V + + PLV + V + +++I+ L QN
Sbjct: 278 -PSLRVTEPRRRQPLVAVNGVEGDPSFEEVIECLASQN 314
>UniRef50_Q53WB7 Cluster: Repeat motif-containing protein; n=4;
Thermus thermophilus|Rep: Repeat motif-containing
protein - Thermus thermophilus (strain HB8 / ATCC 27634
/ DSM 579)
Length = 277
Score = 37.1 bits (82), Expect = 0.43
Identities = 21/83 (25%), Positives = 41/83 (49%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESR 183
E E L R+ E+E L+ I + R ++ K+ +I ET A ++ AVE++
Sbjct: 165 ETETRLGTRIQEVEAKLERQIQETEARLGTRIQEVEAKLDRQIQETEAQLEARIHAVETK 224
Query: 184 THALVKDLVGGLADDVVAAKQEL 252
++++ L ++A +QE+
Sbjct: 225 LEGRIQEVENRLEAQILALRQEM 247
>UniRef50_UPI00015B5D3A Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 388
Score = 36.7 bits (81), Expect = 0.57
Identities = 26/97 (26%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Frame = +1
Query: 376 EGSQETADEVLARVKRAVDARGTGLKI-NKVRKAKNQTIILGCDTEEERKKVQEIIESRG 552
E ++ DE+L V RG +I K + I+L EE+RKK E++E
Sbjct: 190 ENFKKFKDEILRNCSTGV--RGLKEEIFQKPERLHLTLIMLVLLDEEDRKKAIEVLEICK 247
Query: 553 DGLVVAPMKNKSPLVV-LKDVFVESEDDDMIKALHVQ 660
+ +V+ +K P+ + K V + ++D ++ L++Q
Sbjct: 248 EQVVIPTLKKNGPITIEFKGVQIMNDDPSEVEVLYIQ 284
>UniRef50_Q25662 Cluster: Repeat organellar protein; n=5; Plasmodium
(Vinckeia)|Rep: Repeat organellar protein - Plasmodium
chabaudi
Length = 1939
Score = 36.7 bits (81), Expect = 0.57
Identities = 23/85 (27%), Positives = 47/85 (55%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESR 183
EVEK LN +E + K ++I+L +E+ SD+++K+ + +E + + +E
Sbjct: 1043 EVEKKNASLLNMLEENHKNEMIKLKEEHKESASDLVEKLYQKDEEVK----NSNNKIEEL 1098
Query: 184 THALVKDLVGGLADDVVAAKQELTE 258
T+ ++KD L D ++ K+++ E
Sbjct: 1099 TN-VIKD----LNDSIMCYKKQILE 1118
>UniRef50_A2DWI6 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 552
Score = 36.7 bits (81), Expect = 0.57
Identities = 28/96 (29%), Positives = 48/96 (50%)
Frame = +1
Query: 385 QETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESRGDGLV 564
+ETA R+ V+ T K++++RK +++ + D EERKK +EI+ + D L
Sbjct: 191 EETAQLENKRIDVEVEIETTNAKLDEIRKERHKNEQILQDILEERKKNEEILLNSQDELK 250
Query: 565 VAPMKNKSPLVVLKDVFVESEDDDMIKALHVQNKNI 672
K ++ LKD +E+ IKA K++
Sbjct: 251 SIEEKKRTLEEQLKDFESRAEE---IKAFEESKKDM 283
>UniRef50_Q2JUM5 Cluster: Putative uncharacterized protein; n=2;
Synechococcus|Rep: Putative uncharacterized protein -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 105
Score = 36.3 bits (80), Expect = 0.75
Identities = 22/97 (22%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLNDENDGRG--SDMIDKIIDRIDETRAAMDQTTEAVE 177
E E+ L + + E++ + + + + + +G+ + + +DR DE A+++ TEA+E
Sbjct: 4 EQEQWLIRAVQELQAAQQNQQVLIQELREGQAMLAQFFREALDRFDERTRAIERRTEALE 63
Query: 178 SRTHALVK--DLVGGLADDVVAAKQELTEVAKGLACD 282
RT AL + + + D++ +E+ + + L D
Sbjct: 64 RRTEALERRTEALERRTDEMAQEMREMRQEIRDLRRD 100
>UniRef50_Q583I7 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 586
Score = 36.3 bits (80), Expect = 0.75
Identities = 32/86 (37%), Positives = 43/86 (50%)
Frame = +1
Query: 16 ALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESRTHAL 195
AL KR E+E K I +L DEND R I+K+I D +A D E V+ R L
Sbjct: 162 ALLKRNAELEAETKAMIARLKDENDKR----IEKLIR--DHEKALKD-LQEKVDEREREL 214
Query: 196 VKDLVGGLADDVVAAKQELTEVAKGL 273
V G+ +D+ A Q++TE L
Sbjct: 215 V-----GINNDLEALLQQMTEQKNSL 235
>UniRef50_Q22C20 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 908
Score = 36.3 bits (80), Expect = 0.75
Identities = 19/78 (24%), Positives = 41/78 (52%)
Frame = +1
Query: 397 DEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESRGDGLVVAPM 576
++ +A V +D LKI++V+KA+N+ I+G ++ + ++E IE +G +
Sbjct: 346 EQKIAIVSNILDGESKALKIDEVQKAENENQIMG---DDNNQYIEEDIEDSANGTQMTQQ 402
Query: 577 KNKSPLVVLKDVFVESED 630
+ + L+ + E E+
Sbjct: 403 RQMTQAQFLQQLIQEKEN 420
>UniRef50_UPI000049A29E Cluster: Viral A-type inclusion protein
repeat; n=2; Entamoeba histolytica HM-1:IMSS|Rep: Viral
A-type inclusion protein repeat - Entamoeba histolytica
HM-1:IMSS
Length = 1813
Score = 35.9 bits (79), Expect = 0.99
Identities = 21/85 (24%), Positives = 45/85 (52%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESR 183
E+EK K LN+++ +I++LN + D ++ +I+ + E + +++ + +E
Sbjct: 1172 ELEKN-KKELNDLQTKYDNEILELN-----KNKDELNSLINNLKEEKTNLEEQVKKMEEE 1225
Query: 184 THALVKDLVGGLADDVVAAKQELTE 258
L+ +L G +D V +ELT+
Sbjct: 1226 KSKLITELSNG-SDGVSKLNEELTQ 1249
>UniRef50_Q3IKW1 Cluster: Putative uncharacterized protein; n=1;
Pseudoalteromonas haloplanktis TAC125|Rep: Putative
uncharacterized protein - Pseudoalteromonas haloplanktis
(strain TAC 125)
Length = 168
Score = 35.1 bits (77), Expect = 1.7
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Frame = +1
Query: 364 AVTLEGSQETADEVLARVKRAVDARGTG-LKINKVRKAKNQTI---ILG-----CDTEEE 516
A+ + ++TA +++ +K+ +D K+ K KA+N+ + ++ D E
Sbjct: 55 AILDDNEKKTAGQLIGLLKKHIDVDSAAEQKLAKALKARNKLVHRFLIDNIERFVDAHER 114
Query: 517 RKKVQEIIESRGDGLVVAPMKNKSPLVVLKDVFVESEDDDM 639
V+EI E RG + A +K+ PL++L +VE+E D+
Sbjct: 115 TLLVKEIRELRGQ--IRASIKSLDPLIILLSKYVENEPVDI 153
>UniRef50_A7PRD8 Cluster: Chromosome chr14 scaffold_26, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_26, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 625
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 7 VEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESRT 186
V ++K L +E+ D + LN DGR D++DK ++ ++AA + +T+ +
Sbjct: 138 VSGTMSKELESLEMGAIEDSVALNT-GDGRNEDLVDKACEQSITSQAAQNVSTDTNDREA 196
Query: 187 HAL 195
A+
Sbjct: 197 KAM 199
>UniRef50_A5UQK5 Cluster: Sensor protein; n=2; Roseiflexus|Rep: Sensor
protein - Roseiflexus sp. RS-1
Length = 1017
Score = 34.3 bits (75), Expect = 3.0
Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Frame = +1
Query: 64 IIQLNDENDGRGSDMIDKIID--RIDETRAAMDQTTEAVESRTHALVKDLVGGLADDVVA 237
++Q+ + DMI+ ++D R++ R +++ + H V+ L D +
Sbjct: 831 VLQIASTSAANMLDMINTLLDISRLEAGRMPIERCIGNIRDIIHDSVQRLASLALDRAIT 890
Query: 238 AKQELTEVAKGLACDINLXXXXXXXXXXXXXXXXHRPALHSMAVTLEGSQETADEVLARV 417
+ E+ E + D+ L HR L VT+ + ETAD+ +V
Sbjct: 891 IRTEVEEDVPDIYADLGLISRIIQNLVSNAIKFSHRGGL----VTVRAAVETADDGQPKV 946
Query: 418 KRAVDARGTGL 450
+V +G G+
Sbjct: 947 IVSVSDQGVGI 957
>UniRef50_UPI0000D66813 Cluster: PREDICTED: similar to KIAA1858
protein; n=1; Mus musculus|Rep: PREDICTED: similar to
KIAA1858 protein - Mus musculus
Length = 3633
Score = 33.9 bits (74), Expect = 4.0
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 465 TQGEKPNYYIGLRHRGGKKE--SPRDN-RESWGWTGSSAHEEQEPSRCPEGC 611
++ + P Y+I + HR +K P+D+ R G H EQ P+ PE C
Sbjct: 2264 SRSDSPQYHISISHRPPQKNFSDPQDHKRRPRGLNKKPEHAEQTPAELPETC 2315
>UniRef50_Q7WNX2 Cluster: Type III restriction enzyme; n=3;
Bacteria|Rep: Type III restriction enzyme - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 1028
Score = 33.9 bits (74), Expect = 4.0
Identities = 20/88 (22%), Positives = 43/88 (48%)
Frame = +1
Query: 10 EKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESRTH 189
++ + K + EM+ +L+ +Q + + + + + R D + A QT +S
Sbjct: 755 DELVQKAVKEMDAALRVTPLQYTIQAGEQIDQVTGEALKRGDGFKVAETQTEYNKQSIHS 814
Query: 190 ALVKDLVGGLADDVVAAKQELTEVAKGL 273
A+ DL+G LA+ ++ + E+ KG+
Sbjct: 815 AVKYDLIGKLAEGTQLTRRTVAEILKGI 842
>UniRef50_Q5TWL3 Cluster: ENSANGP00000028554; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000028554 - Anopheles gambiae
str. PEST
Length = 131
Score = 33.5 bits (73), Expect = 5.3
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 335 PSTVLHFIRWQSLSKVVRRLLTRC 406
PS V+HF RWQSLS V LL+ C
Sbjct: 11 PSVVVHFHRWQSLSLCVLTLLSIC 34
>UniRef50_P32563 Cluster: Vacuolar ATP synthase subunit a, vacuolar
isoform; n=13; Saccharomycetales|Rep: Vacuolar ATP
synthase subunit a, vacuolar isoform - Saccharomyces
cerevisiae (Baker's yeast)
Length = 840
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/90 (22%), Positives = 43/90 (47%)
Frame = +1
Query: 19 LTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESRTHALV 198
+ KR+ ++ SL ++ ++ N+GR S + K+ + + + T+ +ES +A+
Sbjct: 245 IIKRIRKIAESLDANLYDVDSSNEGR-SQQLAKVNKNLSDLYTVLKTTSTTLESELYAIA 303
Query: 199 KDLVGGLADDVVAAKQELTEVAKGLACDIN 288
K+L D V ++ + E+ D N
Sbjct: 304 KELDSWFQD--VTREKAIFEILNKSNYDTN 331
>UniRef50_UPI00006CC373 Cluster: hypothetical protein
TTHERM_00586820; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00586820 - Tetrahymena
thermophila SB210
Length = 998
Score = 33.1 bits (72), Expect = 7.0
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Frame = +1
Query: 388 ETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIES-----RG 552
E E+L + K+ + +N++++ +N I + KK+ EI +S R
Sbjct: 335 EEQQEILKKKKKKKNETTLEEDLNELKEIENDKIEIRKKILRIDKKINEICKSYSTHLRN 394
Query: 553 DGLVVAPMKNKSPLVVLKDVFVESEDDDMIKALHVQNKNIFMG 681
G KN+ + ++ D F ++ + + QN FMG
Sbjct: 395 TGYAFVSFKNEENVQIVTDYFPTNDIERFFSYIFCQNNKSFMG 437
>UniRef50_UPI00006601FF Cluster: Homolog of Homo sapiens "Splice
Isoform 1 of Liprin-alpha 3; n=1; Takifugu rubripes|Rep:
Homolog of Homo sapiens "Splice Isoform 1 of
Liprin-alpha 3 - Takifugu rubripes
Length = 1279
Score = 32.7 bits (71), Expect = 9.2
Identities = 23/86 (26%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Frame = +1
Query: 4 EVEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDE-TRAAMDQTTEAVES 180
++E L ++ E++ + + + ++NDE++ R SD +DK++ +E + + + A+E
Sbjct: 417 QMEAQLEEKNQELQRARQRE--RMNDEHNKRLSDTVDKLLSESNERLQLHLKERMAALEE 474
Query: 181 RTHALVKDL--VGGLADDVVAAKQEL 252
+ +AL ++L + L DD++A K +L
Sbjct: 475 K-NALSEELSNMKKLQDDLLANKDQL 499
>UniRef50_Q31A53 Cluster: Leukotoxin secretion protein-like protein;
n=1; Prochlorococcus marinus str. MIT 9312|Rep:
Leukotoxin secretion protein-like protein -
Prochlorococcus marinus (strain MIT 9312)
Length = 317
Score = 32.7 bits (71), Expect = 9.2
Identities = 22/92 (23%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = +1
Query: 373 LEGSQETADEVLARVKRAVDARGTGLKINKVRKAKNQTIILGCDTEEERKKVQEIIESRG 552
LE S ++ E+L + DA G K+ +++ KN+ LG + ++ +++E+ +
Sbjct: 106 LESSIQSEKEILKEISILADAGGIQ-KLQYLQQ-KNKVSELGYEKKQVEAEIKELNFDKS 163
Query: 553 DGLVVAPMKNK-SPLVVLKDVFVESEDDDMIK 645
L+V+P+K K L+ + F ++ + ++K
Sbjct: 164 KTLLVSPVKGKVFNLISVSKGFAANQGETLLK 195
>UniRef50_Q1PYQ3 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 177
Score = 32.7 bits (71), Expect = 9.2
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 7 VEKALTKRLNEMELSLKTDIIQLNDENDGRGSDMID-KIIDRIDETRAAMDQTTEAVESR 183
V+K+L KR+++++ +L I L D N + D +D K+ RID+ R ++ E V +R
Sbjct: 55 VDKSLNKRIDDLDSNLNKRIDDL-DSNLNKRIDALDSKLNKRIDDLRTDINSRFEEVGNR 113
Query: 184 THAL 195
L
Sbjct: 114 FDTL 117
>UniRef50_Q1PV44 Cluster: Putative uncharacterized protein; n=1;
Candidatus Kuenenia stuttgartiensis|Rep: Putative
uncharacterized protein - Candidatus Kuenenia
stuttgartiensis
Length = 217
Score = 32.7 bits (71), Expect = 9.2
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1
Query: 37 EMELSLKTDIIQLNDENDGRGSDM---IDKIIDRIDETRAAMDQTTEAVESRT 186
EME S++ +I +L E DGR D IDK+ ++ETR + T +AV + T
Sbjct: 5 EMEKSIQ-EIWKLFKETDGRFKDTDKEIDKLSKSVEETRKTSENTNKAVYALT 56
>UniRef50_A4U2K5 Cluster: Methyl-accepting chemotaxis protein; n=1;
Magnetospirillum gryphiswaldense|Rep: Methyl-accepting
chemotaxis protein - Magnetospirillum gryphiswaldense
Length = 474
Score = 32.7 bits (71), Expect = 9.2
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +1
Query: 52 LKTDIIQLNDENDGRGSDMIDKIIDRID---ETRAAMDQTTEAVESRTHAL--VKDLVGG 216
L+++I+ L + D S I ++ + D + AAMD T + V ++HA + G
Sbjct: 292 LQSEILALTNAIDEEVSGAIGMVMTQADAMLDASAAMDGTVDKVRGQSHAAAGAAETATG 351
Query: 217 LADDVVAAKQELT 255
D V AA +EL+
Sbjct: 352 NVDSVAAAAEELS 364
>UniRef50_A3K610 Cluster: Probable chemoreceptor (Methyl-accepting
chemotaxis) transmembrane protein; n=1; Sagittula
stellata E-37|Rep: Probable chemoreceptor
(Methyl-accepting chemotaxis) transmembrane protein -
Sagittula stellata E-37
Length = 827
Score = 32.7 bits (71), Expect = 9.2
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Frame = +1
Query: 16 ALTKRLNEMELSLKTDIIQLNDENDGRGSDMIDKIIDRIDETRAAMDQTTEAVESRTHAL 195
A+ ++L +S++ D+ +L+D + S ++ ++ET AAMDQ + +V+S
Sbjct: 473 AIIEQLRSSAVSMEADVDRLSDGAESLSSRTENQAAT-LEETAAAMDQISASVKSTADG- 530
Query: 196 VKDLVG--GLADDVVAAKQEL 252
K +VG G+A D +E+
Sbjct: 531 AKQIVGAIGVARDQAEQGEEV 551
>UniRef50_Q28ZP1 Cluster: GA14121-PA; n=1; Drosophila
pseudoobscura|Rep: GA14121-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1318
Score = 32.7 bits (71), Expect = 9.2
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +1
Query: 517 RKKVQEIIESRGDGLVVAPMKNKSPLVVLKDVFVESEDDDMIKALHVQNKNIFM--GLPE 690
+KK E+ E++ + ++ K ++P+ KD+F + +D+D+ ++KN+F G P
Sbjct: 561 KKKPIEVQENKKEEDLLVEKKTETPMARKKDLFDDIQDEDLFGT--PKSKNLFARGGEPS 618
Query: 691 EDMPMEIK 714
E+ E K
Sbjct: 619 EEREAETK 626
>UniRef50_A0JMQ7 Cluster: Mitochondrial tumor suppressor 1 homolog;
n=5; Danio rerio|Rep: Mitochondrial tumor suppressor 1
homolog - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 440
Score = 32.7 bits (71), Expect = 9.2
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 124 DRIDETRAAMDQTTEAVESRTHALVKDLVGGLADDVVAAKQELTEVAKG 270
+ D+ +A M+Q E + S+ AL K+L ++V KQ+ E KG
Sbjct: 195 EEADKCKAQMEQQLEEIRSKHEALKKELESSHIEEVDGLKQQFEESFKG 243
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.313 0.131 0.349
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,990,749
Number of Sequences: 1657284
Number of extensions: 12612927
Number of successful extensions: 32055
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32034
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
- SilkBase 1999-2023 -