Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5o04
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.1  
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22...    24   4.1  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             24   5.4  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    24   5.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   5.4  
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    23   9.5  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    23   9.5  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 302 PSHTPASQQPNPSTV 346
           PSH PA  QP P+ V
Sbjct: 369 PSHIPAGSQPVPAVV 383


>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
           protein.
          Length = 1322

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 302 PSHTPASQQPNPSTV 346
           PSH PA  QP P+ V
Sbjct: 368 PSHIPAGSQPVPAVV 382


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 175 ESRTHALVKDLVGGLADDVV 234
           + R +   +DL GGL DDVV
Sbjct: 33  QKRVYIFNEDLSGGLEDDVV 52


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 246 RTYGGRKRTGMRYKPS 293
           R+YG   R+G+RY+ S
Sbjct: 386 RSYGSSNRSGLRYRSS 401


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 302 PSHTPASQQPNPSTVLHFIRWQSLSKVVRRLLTRCSPG 415
           P+H P + Q NP +V      + +  + R L +R  PG
Sbjct: 387 PTHQPTTSQENPESVTD----EEIRNIGRSLKSRKVPG 420


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 420 LHPGEHLVSSLLTTFESD 367
           LHPG H +SS L T   D
Sbjct: 111 LHPGVHQLSSGLVTLVGD 128


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 420 LHPGEHLVSSLLTTFESD 367
           LHPG H +SS L T   D
Sbjct: 112 LHPGVHQLSSGLVTLVGD 129


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.131    0.349 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,274
Number of Sequences: 2352
Number of extensions: 13153
Number of successful extensions: 20
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)