Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5o02
(600 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 27 0.092
S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subu... 25 0.49
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 25 0.65
DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9 prot... 23 2.0
AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16 pro... 22 3.4
AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3 prot... 22 3.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.6
AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5 prot... 21 7.9
AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory recept... 21 7.9
AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory recept... 21 7.9
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 27.5 bits (58), Expect = 0.092
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +3
Query: 306 APAVSDGVVWGLASWGIRKLCGTERYPAM 392
A + G++W L + LCG E YP +
Sbjct: 2154 AMGLGGGMIWALDLDDFKNLCGCEEYPLL 2182
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +3
Query: 192 LDPATCNNITLRFGVFVTENFICLAQD 272
LDP C ++ F NF ++ D
Sbjct: 199 LDPFACTHVIYAFATIDPHNFNMISND 225
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +3
Query: 324 GVVWGLASWGIRKLCGTERYPAM 392
G++W L + CG R+P +
Sbjct: 1735 GMIWALDLDDFKNRCGEGRHPLL 1757
Score = 21.0 bits (42), Expect = 7.9
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = +3
Query: 324 GVVWGLASWGIRKLCGTERYPAMFS----YLASPSNLDFITNAT 443
G+VW L + CG ++P + + +PS++ +TN T
Sbjct: 2658 GMVWALDLDDFKNRCGCGKHPLLKTLNNELRGTPSDIS-VTNCT 2700
>S78567-1|AAB34900.1| 141|Tribolium castaneum GABA receptor subunit
protein.
Length = 141
Score = 25.0 bits (52), Expect = 0.49
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 154 QTATACRYTRLGCWTQRRATTLRSDSECLLPRTSYV 261
+ AT R LG T TTL S + LP+ SYV
Sbjct: 93 RNATPARVA-LGVTTVLTMTTLMSSTNAALPKISYV 127
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 24.6 bits (51), Expect = 0.65
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = -2
Query: 359 PYAPRRKAPYYAITHSWRPGVPSARRPLPVLSQTYEVLGNKHS 231
PY + P Y + S+ RR + +S+ +EV N H+
Sbjct: 451 PYQDQEYQPIYFVAESFDDMKDKFRRWVSAMSRPFEVRFNPHT 493
>DQ659249-1|ABG47447.1| 383|Tribolium castaneum chitinase 9
protein.
Length = 383
Score = 23.0 bits (47), Expect = 2.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 327 VVWGLASWGIRKLCGTERYPAM 392
+VW L + R +CG YP M
Sbjct: 354 MVWSLDTDDFRGICGKGPYPIM 375
>AY873915-1|AAW67571.2| 384|Tribolium castaneum chitinase 16
protein.
Length = 384
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 327 VVWGLASWGIRKLCGTERYPAM 392
+VW L + R +CG YP +
Sbjct: 355 MVWSLDTDDFRGICGNGPYPIL 376
>AY873914-1|AAW67570.1| 384|Tribolium castaneum chitinase 3
protein.
Length = 384
Score = 22.2 bits (45), Expect = 3.4
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 327 VVWGLASWGIRKLCGTERYPAM 392
+VW L + R +CG YP +
Sbjct: 355 MVWSLDTDDFRGICGNGPYPIL 376
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -2
Query: 275 PVLSQTYEVLGNKHSESERNVVAR 204
P T+E+ G + S SERN + +
Sbjct: 441 PTPEITWELYGRRLSNSERNQIGQ 464
>AY675073-1|AAV74190.1| 533|Tribolium castaneum chitinase 5
protein.
Length = 533
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 352 PHDARPHTTPSLTAGAPV 299
P ARP +TPS PV
Sbjct: 410 PEWARPPSTPSADGSKPV 427
>AM292381-1|CAL23193.2| 364|Tribolium castaneum gustatory receptor
candidate 60 protein.
Length = 364
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 210 NNITLRFGVFVTENFICLAQD 272
N++ L VF+T NF+ L D
Sbjct: 211 NSLILDLLVFITINFVVLLGD 231
>AM292376-1|CAL23188.2| 402|Tribolium castaneum gustatory receptor
candidate 55 protein.
Length = 402
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 511 FIGFDRGNLSMNGYCLFSDS 452
FI FD+ + S N Y L ++S
Sbjct: 381 FIQFDQSSNSRNNYVLTNNS 400
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,390
Number of Sequences: 336
Number of extensions: 3481
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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