Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5n21
(616 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 180 1e-45
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 49 3e-06
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 49 3e-06
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 37 0.013
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 32 0.28
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 32 0.37
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 29 2.0
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 2.0
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 2.0
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 29 3.5
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 29 3.5
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 28 6.1
U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical p... 28 6.1
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical ... 27 8.1
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 27 8.1
AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical ... 27 8.1
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 27 8.1
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 180 bits (437), Expect = 1e-45
Identities = 93/166 (56%), Positives = 109/166 (65%), Gaps = 5/166 (3%)
Frame = +2
Query: 134 CRVGRLATKTVVNNATEKASLVTGAAVNKRDYAAKASXXXXXXXXXXXXXXXXXX----- 298
C + + + NN K + TG A + A K S
Sbjct: 24 CALPAASIRLSSNNVESKKGIHTGVATQQAAAATKVSAKATAANASGRIVAVIGAVVDVQ 83
Query: 299 FEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRI 478
F++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G PI+I
Sbjct: 84 FDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDPIKI 143
Query: 479 PVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQ 616
PVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+Q
Sbjct: 144 PVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQ 189
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 371 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 550
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122
Query: 551 PTDKTAAIHAEAPEFVD-MSVQQ 616
+ + + +AP + +SV++
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVRE 145
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 371 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 550
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149
Query: 551 PTDKTAAIHAEAPEFVD-MSVQQ 616
+ + + +AP + +SV++
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVRE 172
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 383 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPI 550
+ +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+
Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPV 127
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 458 SGSPIRIPVGAETLGRIINVIGEPIDERGPI-PTD 559
+G R PV + LGRI N G+PID+ P+ P D
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPED 143
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 31.9 bits (69), Expect = 0.37
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +2
Query: 422 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 538
T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 416 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 592
D +G + G+P+ +D G ++ P G E + ++ N GEP+DE A I + E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209
Query: 593 FVDMSV 610
+++V
Sbjct: 210 HAELTV 215
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -2
Query: 603 MSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 424
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 9 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68
Query: 423 VPSMAMVRTVFSP 385
P+ A +T P
Sbjct: 69 TPTAAPPKTCAPP 81
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -2
Query: 603 MSTNSGASAWIAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 424
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197
Query: 423 VPSMAMVRTVFSP 385
P+ A +T P
Sbjct: 198 TPTAAPPKTCAPP 210
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = +1
Query: 190 ITGDWSRCEQT*LCSQGFRQRAR*GSCRYWCRSGCSV*RQLAADPKCP*GAKSISPXXXX 369
I GDWS+C + C G+R+R+ SC S C R+ KC + P
Sbjct: 1494 IIGDWSKCSAS--CGGGWRRRS--VSC---TSSSCDETRKPKMFDKC--NEELCPPLTNN 1544
Query: 370 XXXXXXREHCTYHCHGRY*RLSPW 441
HC+ C G R W
Sbjct: 1545 SWQISPWTHCSVSCGGGVQRRKIW 1568
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 28.7 bits (61), Expect = 3.5
Identities = 24/84 (28%), Positives = 32/84 (38%)
Frame = +1
Query: 190 ITGDWSRCEQT*LCSQGFRQRAR*GSCRYWCRSGCSV*RQLAADPKCP*GAKSISPXXXX 369
I GDWS+C + C G+R+R+ SC S C R+ KC + P
Sbjct: 1494 IIGDWSKCSAS--CGGGWRRRS--VSC---TSSSCDETRKPKMFDKC--NEELCPPLTNN 1544
Query: 370 XXXXXXREHCTYHCHGRY*RLSPW 441
HC+ C G R W
Sbjct: 1545 SWQISPWTHCSVSCGGGVQRRKIW 1568
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/35 (34%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +2
Query: 515 VIGEPIDERGPIPTDKTAAIHAEAPEFVD-MSVQQ 616
V+G PID +GPI + + + +AP + +SV++
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVRE 137
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 94 LNFQKYYRNVSYCLQSRPFGYEDSSKQC 177
L QKYY + Y LQS+P +K C
Sbjct: 130 LPHQKYYNSEQYALQSQPCNQYQMNKLC 157
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/62 (29%), Positives = 27/62 (43%)
Frame = -2
Query: 198 TSDAFSVALFTTVFVAKRPTLQTVGNISIIFLKI**KGSKVGSNWLRKSQILYVTIRPVP 19
TS FSV LF +F++ + GN I LK+ N +K + R +P
Sbjct: 4 TSLVFSVLLFDLIFISNCDYIHLPGNSDIPDLKLQSGYLNANENGTQKMFYFLLEARDIP 63
Query: 18 MG 13
+G
Sbjct: 64 VG 65
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -1
Query: 115 DNIFENLVERQQSRIELVTKITNSLRNDPSSADGRMR 5
D IFE + ER + E+V K+ S R + ADG+ +
Sbjct: 6 DVIFEEIKERIATDKEMVKKVGTSFRMTIAGADGKTK 42
>U41533-13|AAA83174.3| 955|Caenorhabditis elegans Hypothetical
protein R05F9.12 protein.
Length = 955
Score = 27.9 bits (59), Expect = 6.1
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = -1
Query: 235 GCIVTFVHSGSSHQ*CFFSSIVYYCLRSQTAYSADSRKHFDNIFENLVERQQSRIELVTK 56
GCI +G + C+F V Y L SQ + + RK+ N + I+L TK
Sbjct: 39 GCIWKEDDTGKNAPWCYFKDGVGYNLDSQQGSTYNLRKNGGP--SNPWGADSTEIKLTTK 96
Query: 55 ITNSLRNDPSSADGR 11
S+ N DGR
Sbjct: 97 SIGSVLNVKIGIDGR 111
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 27.5 bits (58), Expect = 8.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -2
Query: 531 IGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPSVPSMAMVRTVFS 388
+G P + RP P+ S+TG RT+P+VP+++ R + S
Sbjct: 284 LGIPAPAVPRPVAGKPST----RSASTTGAARTRPAVPAVSAPRALTS 327
>AF040649-6|AAB95006.1| 1360|Caenorhabditis elegans Hypothetical
protein F33H12.6 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 609 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 511
++M SG S WI +L+VG G + S +TL
Sbjct: 1098 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1130
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 609 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 511
++M SG S WI +L+VG G + S +TL
Sbjct: 1204 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1236
>AF016415-3|AAW88418.1| 658|Caenorhabditis elegans Hypothetical
protein C02A12.8 protein.
Length = 658
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 3/93 (3%)
Frame = -1
Query: 286 YGTNNGNYLTLPFAGSLGCIVTFVHSGSSHQ*CFFSSIVYYCLRSQTAY---SADSRKHF 116
Y N+GN + S ++ F +S SH +S YY L+ A S DS
Sbjct: 433 YPKNDGNISVMTIGNSY--VMQFTNSIKSHFKQNYSDYWYYSLQEGFALYADSYDSGNAL 490
Query: 115 DNIFENLVERQQSRIELVTKITNSLRNDPSSAD 17
N+ + + + ++ K + SLR + D
Sbjct: 491 KTFKRNVAQHKPDVLFIIAKYSQSLRTSFQAND 523
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 609 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 511
++M SG S WI +L+VG G + S +TL
Sbjct: 1204 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1236
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 609 TDMSTNSGASAWIAAVLSVGMGPRSSIGSPITL 511
++M SG S WI +L+VG G + S +TL
Sbjct: 1103 SNMRVTSGDSDWIQFLLNVGDGSANDSDSKVTL 1135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,869,865
Number of Sequences: 27780
Number of extensions: 322692
Number of successful extensions: 830
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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