BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5n12
(759 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 56 1e-09
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 56 1e-09
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 56 1e-09
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 27 0.63
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 27 0.63
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 25 3.3
CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein ... 25 3.3
AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking p... 23 7.7
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 56.0 bits (129), Expect = 1e-09
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Frame = +1
Query: 154 DGRARGYRAGLTHTAVVPLDLVKCRLQVDA--------EKYKNVVNGFKVSVREEGVRGL 309
D A G A ++ TAV P++ VK LQV A ++YK +V+ F +E+G+
Sbjct: 13 DFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAF 72
Query: 310 AKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIA 489
+G I Y F F +V+K + G +D T + +R F+ S A +
Sbjct: 73 WRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQF-WRYFLGNLGSGGAAGATSLC 131
Query: 490 -LSPMEAAKVRI--QTMPGFA----STLREAWPKMVKNEGYGTFYKGLVPLWGRQIPYTM 648
+ P++ A+ R+ PG + L + K VK++G Y+G I Y
Sbjct: 132 FVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGIIIYRA 191
Query: 649 MKFACFERTLELL 687
F CF+ +L
Sbjct: 192 AYFGCFDTAKGML 204
Score = 42.7 bits (96), Expect = 1e-05
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Frame = +1
Query: 169 GYRAGLTHTAVV-PLDLVKCRLQVDA------EKYKNVVNGFKVSVREEGVRGLAKGWAP 327
G AG T V PLD + RL D ++ +++ K +V+ +G+ GL +G+
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNV 181
Query: 328 TFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEA 507
+ G + FG ++ K GML D + FV A + + I P +
Sbjct: 182 SVQGIIIYRAAYFGCFDTAK----GMLPDPKNTSI--FVSWAIAQVVTTASGIISYPFDT 235
Query: 508 AKVRI--QTMPG-----FASTLREAWPKMVKNEGYGTFYKG 609
+ R+ Q+ P + +TL + W K+ K EG G F+KG
Sbjct: 236 VRRRMMMQSWPCKSEVMYKNTL-DCWVKIGKQEGSGAFFKG 275
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 56.0 bits (129), Expect = 1e-09
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 15/193 (7%)
Frame = +1
Query: 154 DGRARGYRAGLTHTAVVPLDLVKCRLQVDA--------EKYKNVVNGFKVSVREEGVRGL 309
D A G A ++ TAV P++ VK LQV A ++YK +V+ F +E+G+
Sbjct: 13 DFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAF 72
Query: 310 AKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIA 489
+G I Y F F +V+K + G +D T + +R F+ S A +
Sbjct: 73 WRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQF-WRYFLGNLGSGGAAGATSLC 131
Query: 490 -LSPMEAAKVRI--QTMPGFA----STLREAWPKMVKNEGYGTFYKGLVPLWGRQIPYTM 648
+ P++ A+ R+ PG + L + K VK++G Y+G I Y
Sbjct: 132 FVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGIIIYRA 191
Query: 649 MKFACFERTLELL 687
F CF+ +L
Sbjct: 192 AYFGCFDTAKGML 204
Score = 42.7 bits (96), Expect = 1e-05
Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Frame = +1
Query: 169 GYRAGLTHTAVV-PLDLVKCRLQVDA------EKYKNVVNGFKVSVREEGVRGLAKGWAP 327
G AG T V PLD + RL D ++ +++ K +V+ +G+ GL +G+
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNV 181
Query: 328 TFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEA 507
+ G + FG ++ K GML D + FV A + + I P +
Sbjct: 182 SVQGIIIYRAAYFGCFDTAK----GMLPDPKNTSI--FVSWAIAQVVTTASGIISYPFDT 235
Query: 508 AKVRI--QTMPG-----FASTLREAWPKMVKNEGYGTFYKG 609
+ R+ Q+ P + +TL + W K+ K EG G F+KG
Sbjct: 236 VRRRMMMQSWPCKSEVMYKNTL-DCWVKIGKQEGSGAFFKG 275
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 56.0 bits (129), Expect = 1e-09
Identities = 52/193 (26%), Positives = 83/193 (43%), Gaps = 15/193 (7%)
Frame = +1
Query: 154 DGRARGYRAGLTHTAVVPLDLVKCRLQVDA--------EKYKNVVNGFKVSVREEGVRGL 309
D A G A ++ TAV P++ VK LQV A ++YK +V+ F +E+G+
Sbjct: 13 DFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCFVRIPKEQGIGAF 72
Query: 310 AKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIA 489
+G I Y F F +V+K + G +D T + +R F+ S A +
Sbjct: 73 WRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQF-WRYFLGNLGSGGAAGATSLC 131
Query: 490 -LSPMEAAKVRIQTMPGFASTLRE------AWPKMVKNEGYGTFYKGLVPLWGRQIPYTM 648
+ P++ A+ R+ G + RE K VK++G Y+G I Y
Sbjct: 132 FVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNVSVQGIIIYRA 191
Query: 649 MKFACFERTLELL 687
F CF+ +L
Sbjct: 192 AYFGCFDTAKGML 204
Score = 44.4 bits (100), Expect = 4e-06
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Frame = +1
Query: 169 GYRAGLTHTAVV-PLDLVKCRLQVDA------EKYKNVVNGFKVSVREEGVRGLAKGWAP 327
G AG T V PLD + RL D ++ +++ K +V+ +G+ GL +G+
Sbjct: 122 GGAAGATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVKSDGIIGLYRGFNV 181
Query: 328 TFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEA 507
+ G + FG ++ K GML D + FV A + + I P +
Sbjct: 182 SVQGIIIYRAAYFGCFDTAK----GMLPDPKNTSI--FVSWAIAQVVTTASGIISYPFDT 235
Query: 508 AKVRIQTMPGFAST------LREAWPKMVKNEGYGTFYKG 609
+ R+ G A + + W K+ K EG G F+KG
Sbjct: 236 VRRRMMMQSGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKG 275
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 27.1 bits (57), Expect = 0.63
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 652 SSSCTGSVCPRAAPGPCRTCRN 587
SSSC S+ PR P C CRN
Sbjct: 26 SSSCNNSLNPRTPPN-CARCRN 46
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 27.1 bits (57), Expect = 0.63
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3
Query: 652 SSSCTGSVCPRAAPGPCRTCRN 587
SSSC S+ PR P C CRN
Sbjct: 26 SSSCNNSLNPRTPPN-CARCRN 46
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 142 PVPVDGRARGYRAGLTHTAVVPLD 213
PVP G+ GY+ T TAV LD
Sbjct: 231 PVPSRGKLVGYKIFYTMTAVEDLD 254
Score = 23.4 bits (48), Expect = 7.7
Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%)
Frame = -2
Query: 728 LVHCSRGLGTTYWY---SSSRVRSKQANFIIVYG 636
+VHCS G+G T + S R K I +YG
Sbjct: 869 IVHCSAGVGVTGCFIVIDSMLERMKYEKTIDIYG 902
>CR954256-5|CAJ14146.1| 615|Anopheles gambiae predicted protein
protein.
Length = 615
Score = 24.6 bits (51), Expect = 3.3
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 431 TVPSCTWRRLRRRNSSPTLPCRPWRRLRSVSKPCLVSRAPSARRGRRWSRTKVTARSTRA 610
TV + ++ +RRR+ SPTL RR ++ S A RW ++T+ +
Sbjct: 381 TVRASSFGPMRRRSGSPTLHIH-CRRGLTIETGARCSTAAFFLFLARWFAQQITSSTDAR 439
Query: 611 W 613
W
Sbjct: 440 W 440
>AY578812-1|AAT07317.1| 932|Anopheles gambiae wishful thinking
protein.
Length = 932
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/32 (31%), Positives = 12/32 (37%)
Frame = -3
Query: 694 TGTAAQGCVRSKQTSSSCTGSVCPRAAPGPCR 599
T QGC S SC+ + C P R
Sbjct: 109 TRVVVQGCWGSNDDQESCSSNECVSTTETPTR 140
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 811,379
Number of Sequences: 2352
Number of extensions: 18421
Number of successful extensions: 54
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -