Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5n10
         (729 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC039252-1|AAH39252.2|  229|Homo sapiens FLJ20433 protein protein.     33   1.0  
BC065002-1|AAH65002.1|  229|Homo sapiens FLJ20433 protein protein.     33   1.4  
AK000440-1|BAA91167.1|  252|Homo sapiens protein ( Homo sapiens ...    33   1.4  
AY078383-1|AAL83647.1|  146|Homo sapiens STGC3 protein.                31   4.2  
AY168267-1|AAO38798.1|   98|Homo sapiens immunoglobulin heavy ch...    30   7.4  

>BC039252-1|AAH39252.2|  229|Homo sapiens FLJ20433 protein protein.
          Length = 229

 Score = 33.1 bits (72), Expect = 1.0
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 296 LMELYNPPSERHHQTPLFSIALIKEPTSPHKFPCSSFTLLDFLV 427
           L+E   PP  RH  TP  S+AL    TSPH F C++  +  ++V
Sbjct: 132 LLEQTQPPQNRH-STPWNSLALPGMATSPHPF-CAALGICPYMV 173


>BC065002-1|AAH65002.1|  229|Homo sapiens FLJ20433 protein protein.
          Length = 229

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 296 LMELYNPPSERHHQTPLFSIALIKEPTSPHKFPCSSFTLLDFLV 427
           L+E   PP  RH  TP  S+AL    TSPH F C++  +  ++V
Sbjct: 132 LLEQTQPPQNRH-STPWNSLALPGMATSPHPF-CAALGICPYVV 173


>AK000440-1|BAA91167.1|  252|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20433 fis, clone KAT03767. ).
          Length = 252

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 18/44 (40%), Positives = 25/44 (56%)
 Frame = +2

Query: 296 LMELYNPPSERHHQTPLFSIALIKEPTSPHKFPCSSFTLLDFLV 427
           L+E   PP  RH  TP  S+AL    TSPH F C++  +  ++V
Sbjct: 155 LLEQTQPPQNRH-STPWNSLALPGMATSPHPF-CAALGICPYVV 196


>AY078383-1|AAL83647.1|  146|Homo sapiens STGC3 protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 4.2
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +3

Query: 375 LPPTSFRAAHSHYWISWLWENFPCHSASQNQSI*RPVQSR 494
           LP TS   +HSH+    LW     H  SQ  S+ RP + R
Sbjct: 35  LPDTSLNCSHSHFQTKGLWWPVGSHGQSQQPSL-RPRKFR 73


>AY168267-1|AAO38798.1|   98|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 98

 Score = 30.3 bits (65), Expect = 7.4
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 725 EE*TVWHGSPRRMTNWRAGS-ATRARSRKPRGI 630
           EE  VW G P +   W  G+  TRA S KP G+
Sbjct: 66  EEELVWFGDPNQGDYWGQGTLVTRANSFKPAGL 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,947,857
Number of Sequences: 237096
Number of extensions: 2814575
Number of successful extensions: 10118
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10118
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)