Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5n10
(729 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003553-1|AAO39557.1| 340|Drosophila melanogaster LP10386p pro... 31 1.2
AY069592-1|AAL39737.2| 353|Drosophila melanogaster LD34179p pro... 31 1.2
AL031766-2|CAA21132.1| 339|Drosophila melanogaster EG:84H4.1 pr... 31 1.2
AF236156-1|AAF60321.1| 339|Drosophila melanogaster torsin-like ... 31 1.2
AE014298-655|AAF45969.2| 340|Drosophila melanogaster CG3024-PA ... 31 1.2
AY070889-1|AAL48511.1| 706|Drosophila melanogaster LD46223p pro... 29 4.9
AE013599-574|AAM68847.1| 702|Drosophila melanogaster CG12769-PB... 29 4.9
AE013599-573|AAF59146.3| 706|Drosophila melanogaster CG12769-PA... 29 4.9
AY118336-1|AAM48365.1| 1307|Drosophila melanogaster LD28489p pro... 29 6.5
AY051858-1|AAK93282.1| 1074|Drosophila melanogaster LD35689p pro... 29 6.5
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ... 29 6.5
AE014134-3012|AAN11020.1| 1307|Drosophila melanogaster CG31793-P... 29 6.5
>BT003553-1|AAO39557.1| 340|Drosophila melanogaster LP10386p
protein.
Length = 340
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 LIHITGFPGCGKTFPVTQLLKTKAFKGQYRVAVPTTELRSEWKDHMKLPSSEVWRVSTWE 579
+I G PG GK F Q+ KG V ++++ ++ + V +++
Sbjct: 103 VISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRV-KINNAV 161
Query: 580 TSLMKSAP--VLVIDEVYKMPRGFLD 651
++S P + + DEV KMP G D
Sbjct: 162 RDTLRSCPRSLFIFDEVDKMPSGVFD 187
>AY069592-1|AAL39737.2| 353|Drosophila melanogaster LD34179p
protein.
Length = 353
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 LIHITGFPGCGKTFPVTQLLKTKAFKGQYRVAVPTTELRSEWKDHMKLPSSEVWRVSTWE 579
+I G PG GK F Q+ KG V ++++ ++ + V +++
Sbjct: 116 VISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRV-KINNAV 174
Query: 580 TSLMKSAP--VLVIDEVYKMPRGFLD 651
++S P + + DEV KMP G D
Sbjct: 175 RDTLRSCPRSLFIFDEVDKMPSGVFD 200
>AL031766-2|CAA21132.1| 339|Drosophila melanogaster EG:84H4.1
protein.
Length = 339
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 LIHITGFPGCGKTFPVTQLLKTKAFKGQYRVAVPTTELRSEWKDHMKLPSSEVWRVSTWE 579
+I G PG GK F Q+ KG V ++++ ++ + V +++
Sbjct: 102 VISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRV-KINNAV 160
Query: 580 TSLMKSAP--VLVIDEVYKMPRGFLD 651
++S P + + DEV KMP G D
Sbjct: 161 RDTLRSCPRSLFIFDEVDKMPSGVFD 186
>AF236156-1|AAF60321.1| 339|Drosophila melanogaster torsin-like
protein protein.
Length = 339
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 LIHITGFPGCGKTFPVTQLLKTKAFKGQYRVAVPTTELRSEWKDHMKLPSSEVWRVSTWE 579
+I G PG GK F Q+ KG V ++++ ++ + V +++
Sbjct: 102 VISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRV-KINNAV 160
Query: 580 TSLMKSAP--VLVIDEVYKMPRGFLD 651
++S P + + DEV KMP G D
Sbjct: 161 RDTLRSCPRSLFIFDEVDKMPSGVFD 186
>AE014298-655|AAF45969.2| 340|Drosophila melanogaster CG3024-PA
protein.
Length = 340
Score = 31.5 bits (68), Expect = 1.2
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 400 LIHITGFPGCGKTFPVTQLLKTKAFKGQYRVAVPTTELRSEWKDHMKLPSSEVWRVSTWE 579
+I G PG GK F Q+ KG V ++++ ++ + V +++
Sbjct: 103 VISFHGQPGTGKNFVAEQIADAMYLKGSRSNYVTKYLGQADFPKESEVSNYRV-KINNAV 161
Query: 580 TSLMKSAP--VLVIDEVYKMPRGFLD 651
++S P + + DEV KMP G D
Sbjct: 162 RDTLRSCPRSLFIFDEVDKMPSGVFD 187
>AY070889-1|AAL48511.1| 706|Drosophila melanogaster LD46223p
protein.
Length = 706
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 128 AERGESSAAQ*PMDPSPV*IRLSSGASSGPMVLRC 24
A S Q P P+P LS+G S PM RC
Sbjct: 57 ASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRC 91
>AE013599-574|AAM68847.1| 702|Drosophila melanogaster CG12769-PB,
isoform B protein.
Length = 702
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 128 AERGESSAAQ*PMDPSPV*IRLSSGASSGPMVLRC 24
A S Q P P+P LS+G S PM RC
Sbjct: 53 ASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRC 87
>AE013599-573|AAF59146.3| 706|Drosophila melanogaster CG12769-PA,
isoform A protein.
Length = 706
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -2
Query: 128 AERGESSAAQ*PMDPSPV*IRLSSGASSGPMVLRC 24
A S Q P P+P LS+G S PM RC
Sbjct: 57 ASSASESELQEPRSPTPTPTNLSTGPHSPPMTFRC 91
>AY118336-1|AAM48365.1| 1307|Drosophila melanogaster LD28489p protein.
Length = 1307
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 277 SNMKNETDGVIQSTLRTASSDPTFF---HRLDQRADFPPQVSVQLIHITGFPGCGKTFPV 447
+N+ +TD +IQ+T+R D T HRL+ D + + H+ F G + +
Sbjct: 1215 ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEF---GSPYEL 1271
Query: 448 TQLLKTKAFKG 480
K K F G
Sbjct: 1272 LTASKAKVFHG 1282
>AY051858-1|AAK93282.1| 1074|Drosophila melanogaster LD35689p protein.
Length = 1074
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 277 SNMKNETDGVIQSTLRTASSDPTFF---HRLDQRADFPPQVSVQLIHITGFPGCGKTFPV 447
+N+ +TD +IQ+T+R D T HRL+ D + + H+ F G + +
Sbjct: 982 ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEF---GSPYEL 1038
Query: 448 TQLLKTKAFKG 480
K K F G
Sbjct: 1039 LTASKAKVFHG 1049
>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
protein.
Length = 4671
Score = 29.1 bits (62), Expect = 6.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +1
Query: 289 NETDGVIQSTLRTASSDPTFFHRLDQRADFPPQVSVQLIHITGFPGCGK 435
NE I + + S D F+ L++ DF V VQ + G PG G+
Sbjct: 2686 NEWGDQITNEIVRQSMDMKGFYSLEKPGDFTTIVDVQYVAAMGLPGGGR 2734
>AE014134-3012|AAN11020.1| 1307|Drosophila melanogaster CG31793-PA
protein.
Length = 1307
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = +1
Query: 277 SNMKNETDGVIQSTLRTASSDPTFF---HRLDQRADFPPQVSVQLIHITGFPGCGKTFPV 447
+N+ +TD +IQ+T+R D T HRL+ D + + H+ F G + +
Sbjct: 1215 ANVDPQTDALIQATIRNKFKDCTVLTIAHRLNTIMDSDKVLVMDAGHVVEF---GSPYEL 1271
Query: 448 TQLLKTKAFKG 480
K K F G
Sbjct: 1272 LTASKAKVFHG 1282
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,681,910
Number of Sequences: 53049
Number of extensions: 841193
Number of successful extensions: 2280
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2277
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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