Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5n08
(728 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 321 2e-87
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 321 2e-87
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 321 2e-87
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 321 2e-87
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 321 2e-87
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 45 3e-04
BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein. 31 4.2
BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein. 31 4.2
AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens ... 31 4.2
Z97184-7|CAB09994.2| 610|Homo sapiens chromosome 6 open reading... 30 9.8
BX000343-2|CAI41830.1| 610|Homo sapiens WD repeat domain 46 pro... 30 9.8
BX000343-1|CAI41829.2| 322|Homo sapiens WD repeat domain 46 pro... 30 9.8
BC000388-1|AAH00388.1| 610|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL844527-3|CAI41833.1| 610|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL844527-2|CAM25782.1| 322|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL662827-3|CAI17516.1| 610|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL662827-2|CAM24884.1| 322|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL662820-3|CAI18113.1| 610|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL662820-2|CAM25468.1| 322|Homo sapiens WD repeat domain 46 pro... 30 9.8
AL031228-6|CAA20229.1| 610|Homo sapiens chromosome 6 open readi... 30 9.8
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 321 bits (788), Expect = 2e-87
Identities = 153/214 (71%), Positives = 180/214 (84%)
Frame = +1
Query: 85 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 264
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND--- 77
Query: 265 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 444
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+LR+
Sbjct: 78 EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRL 137
Query: 445 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 624
FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI KDI
Sbjct: 138 FCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDI 197
Query: 625 EKACHGICPLRDVCIRKVKVLKKPRFEISKLMEL 726
EKAC I PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 198 EKACQSIYPLHDVFVRKVKMLKKPKFELGKLMEL 231
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 44.8 bits (101), Expect = 3e-04
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +1
Query: 649 PLRDVCIRKVKVLKKPRFEISKLMEL 726
PL DV +RKVK+LKKP+FE+ KLMEL
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMEL 26
>BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein.
Length = 533
Score = 31.1 bits (67), Expect = 4.2
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 466 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 642
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 643 ICPLRDVCIRKVKVLKKPRFEISKLMEL 726
LR++ + K +++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein.
Length = 369
Score = 31.1 bits (67), Expect = 4.2
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 466 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 642
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 643 ICPLRDVCIRKVKVLKKPRFEISKLMEL 726
LR++ + K +++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23282 fis, clone HEP07626. ).
Length = 538
Score = 31.1 bits (67), Expect = 4.2
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Frame = +1
Query: 466 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 642
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 643 ICPLRDVCIRKVKVLKKPRFEISKLMEL 726
LR++ + K +++ + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>Z97184-7|CAB09994.2| 610|Homo sapiens chromosome 6 open reading
frame 11 protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>BX000343-2|CAI41830.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>BX000343-1|CAI41829.2| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>BC000388-1|AAH00388.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL844527-3|CAI41833.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL844527-2|CAM25782.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL662827-3|CAI17516.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL662827-2|CAM24884.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL662820-3|CAI18113.1| 610|Homo sapiens WD repeat domain 46
protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
>AL662820-2|CAM25468.1| 322|Homo sapiens WD repeat domain 46
protein.
Length = 322
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 222 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 260
>AL031228-6|CAA20229.1| 610|Homo sapiens chromosome 6 open reading
frame 11 protein.
Length = 610
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -3
Query: 702 ETGLLQHFHLSDANIAQRADAMAGLLDVLGNGVRNQLVH 586
ETG L + +S I +A AG LDV+ N ++H
Sbjct: 295 ETGFLTYLDVSVGKIVAALNARAGRLDVMSQNPYNAVIH 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,920,734
Number of Sequences: 237096
Number of extensions: 2447903
Number of successful extensions: 10139
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 9620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10122
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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