Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5n05
         (735 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538347-1|CAD98142.1|  242|Homo sapiens hypothetical protein pr...   156   7e-38
BC113694-1|AAI13695.1|  254|Homo sapiens NFU1 iron-sulfur cluste...   156   7e-38
BC113692-1|AAI13693.1|  254|Homo sapiens NFU1 iron-sulfur cluste...   156   7e-38
AY335194-1|AAQ73784.1|  254|Homo sapiens NifU-like protein HIRIP...   156   7e-38
AY286307-1|AAP92373.1|  230|Homo sapiens cytosolic iron-sulfur c...   156   7e-38
AY286306-1|AAP92372.1|  254|Homo sapiens iron-sulfur cluster sca...   156   7e-38
AJ132584-1|CAB53015.1|  196|Homo sapiens HIRA-interacting protei...   154   4e-37
AC114772-2|AAY14828.1|  196|Homo sapiens unknown protein.             154   4e-37
AF132967-1|AAD27742.1|  231|Homo sapiens CGI-33 protein protein.      144   4e-34

>BX538347-1|CAD98142.1|  242|Homo sapiens hypothetical protein
           protein.
          Length = 242

 Score =  156 bits (379), Expect = 7e-38
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 51  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 109

Query: 588 KAVFFGPEFITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           K+VFFGP+FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 110 KSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 158


>BC113694-1|AAI13695.1|  254|Homo sapiens NFU1 iron-sulfur cluster
           scaffold homolog (S. cerevisiae) protein.
          Length = 254

 Score =  156 bits (379), Expect = 7e-38
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 51  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 109

Query: 588 KAVFFGPEFITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           K+VFFGP+FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 110 KSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 158


>BC113692-1|AAI13693.1|  254|Homo sapiens NFU1 iron-sulfur cluster
           scaffold homolog (S. cerevisiae) protein.
          Length = 254

 Score =  156 bits (379), Expect = 7e-38
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 51  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 109

Query: 588 KAVFFGPEFITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           K+VFFGP+FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 110 KSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 158


>AY335194-1|AAQ73784.1|  254|Homo sapiens NifU-like protein HIRIP5
           protein.
          Length = 254

 Score =  156 bits (379), Expect = 7e-38
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 51  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 109

Query: 588 KAVFFGPEFITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           K+VFFGP+FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 110 KSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 158


>AY286307-1|AAP92373.1|  230|Homo sapiens cytosolic iron-sulfur
           cluster scaffold protein Nfu protein.
          Length = 230

 Score =  156 bits (379), Expect = 7e-38
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 27  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 85

Query: 588 KAVFFGPEFITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           K+VFFGP+FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 86  KSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 134


>AY286306-1|AAP92372.1|  254|Homo sapiens iron-sulfur cluster
           scaffold protein Nfu protein.
          Length = 254

 Score =  156 bits (379), Expect = 7e-38
 Identities = 72/109 (66%), Positives = 89/109 (81%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 51  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 109

Query: 588 KAVFFGPEFITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           K+VFFGP+FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 110 KSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 158


>AJ132584-1|CAB53015.1|  196|Homo sapiens HIRA-interacting protein
           HIRIP5 protein.
          Length = 196

 Score =  154 bits (373), Expect = 4e-37
 Identities = 70/101 (69%), Positives = 86/101 (85%)
 Frame = +3

Query: 432 MFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGVKAVFFGPE 611
           MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GVK+VFFGP+
Sbjct: 1   MFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPD 59

Query: 612 FITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 60  FITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 100


>AC114772-2|AAY14828.1|  196|Homo sapiens unknown protein.
          Length = 196

 Score =  154 bits (373), Expect = 4e-37
 Identities = 70/101 (69%), Positives = 86/101 (85%)
 Frame = +3

Query: 432 MFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGVKAVFFGPE 611
           MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GVK+VFFGP+
Sbjct: 1   MFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPD 59

Query: 612 FITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKPS 734
           FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  PS
Sbjct: 60  FITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETPS 100


>AF132967-1|AAD27742.1|  231|Homo sapiens CGI-33 protein protein.
          Length = 231

 Score =  144 bits (348), Expect = 4e-34
 Identities = 69/109 (63%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = +3

Query: 408 AIFASFRTMFIQTQDTPNPNCLKFLPGTKVLEPGQTLDFPNIGAAHCSPLAKMLFRIDGV 587
           A +   R MFIQTQDTPNPN LKF+PG  VLE  +T+DFP   AA  SPLA+ LFRI+GV
Sbjct: 27  AFYHPVRYMFIQTQDTPNPNSLKFIPGKPVLET-RTMDFPTPAAAFRSPLARQLFRIEGV 85

Query: 588 KAVFFGPE-FITVTKQDDDVDWKLLKPEIFGTIMDFFASGLPVVTDAKP 731
           K+VFF  + FITVTK+++++DW LLKP+I+ TIMDFFASGLP+VT+  P
Sbjct: 86  KSVFFWDQIFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVTEETP 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,617,816
Number of Sequences: 237096
Number of extensions: 1885696
Number of successful extensions: 7605
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7595
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8735159784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)