Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5m14
(671 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011492-1|AAR99150.1| 138|Drosophila melanogaster GM13193p pro... 89 4e-18
AE014297-4723|AAN14268.1| 138|Drosophila melanogaster CG1746-PC... 89 4e-18
AE014297-4722|AAF57131.1| 138|Drosophila melanogaster CG1746-PB... 89 4e-18
AE014297-4721|AAN14267.1| 138|Drosophila melanogaster CG1746-PA... 89 4e-18
M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha... 33 0.35
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros... 33 0.35
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro... 33 0.35
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA... 33 0.35
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P... 31 1.1
M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein... 31 1.4
AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA... 31 1.4
AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB... 31 1.4
AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC... 29 7.6
AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB... 29 7.6
AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA... 29 7.6
>BT011492-1|AAR99150.1| 138|Drosophila melanogaster GM13193p
protein.
Length = 138
Score = 89.4 bits (212), Expect = 4e-18
Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Frame = +1
Query: 121 VRPLA-AVPTHTQMVPAVPTQ----LSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXX 285
+RPL+ A+ + +Q + A T L +RSFQT+ VT+DIDSAAKF
Sbjct: 25 LRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGS 84
Query: 286 XXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 396
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 85 GAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121
>AE014297-4723|AAN14268.1| 138|Drosophila melanogaster CG1746-PC,
isoform C protein.
Length = 138
Score = 89.4 bits (212), Expect = 4e-18
Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Frame = +1
Query: 121 VRPLA-AVPTHTQMVPAVPTQ----LSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXX 285
+RPL+ A+ + +Q + A T L +RSFQT+ VT+DIDSAAKF
Sbjct: 25 LRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGS 84
Query: 286 XXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 396
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 85 GAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121
>AE014297-4722|AAF57131.1| 138|Drosophila melanogaster CG1746-PB,
isoform B protein.
Length = 138
Score = 89.4 bits (212), Expect = 4e-18
Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Frame = +1
Query: 121 VRPLA-AVPTHTQMVPAVPTQ----LSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXX 285
+RPL+ A+ + +Q + A T L +RSFQT+ VT+DIDSAAKF
Sbjct: 25 LRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGS 84
Query: 286 XXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 396
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 85 GAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121
>AE014297-4721|AAN14267.1| 138|Drosophila melanogaster CG1746-PA,
isoform A protein.
Length = 138
Score = 89.4 bits (212), Expect = 4e-18
Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Frame = +1
Query: 121 VRPLA-AVPTHTQMVPAVPTQ----LSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXX 285
+RPL+ A+ + +Q + A T L +RSFQT+ VT+DIDSAAKF
Sbjct: 25 LRPLSSAIISQSQTLAAQNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGS 84
Query: 286 XXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 396
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 85 GAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 121
>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
protein.
Length = 1639
Score = 33.1 bits (72), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = -3
Query: 297 NTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMG---GYSCKW 127
N SG +C C + S + S +C HCR R C G+S +
Sbjct: 946 NIRSGNGCENCLCDPVGSYNSTCDRYSGQC-----HCRPGVMGQRCDQCENYFYGFSSEG 1000
Query: 126 SHQCRVAEDGRPGCRGDQSG 67
C E G G + DQ+G
Sbjct: 1001 CKPCECDESGSKGFQCDQNG 1020
>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
Drosophila mRNA forlaminin B2 chain. ).
Length = 1639
Score = 33.1 bits (72), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = -3
Query: 297 NTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMG---GYSCKW 127
N SG +C C + S + S +C HCR R C G+S +
Sbjct: 946 NIRSGNGCENCLCDPVGSYNSTCDRYSGQC-----HCRPGVMGQRCDQCENYFYGFSSEG 1000
Query: 126 SHQCRVAEDGRPGCRGDQSG 67
C E G G + DQ+G
Sbjct: 1001 CKPCECDESGSKGFQCDQNG 1020
>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p protein.
Length = 1639
Score = 33.1 bits (72), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = -3
Query: 297 NTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMG---GYSCKW 127
N SG +C C + S + S +C HCR R C G+S +
Sbjct: 946 NIRSGNGCENCLCDPVGSYNSTCDRYSGQC-----HCRPGVMGQRCDQCENYFYGFSSEG 1000
Query: 126 SHQCRVAEDGRPGCRGDQSG 67
C E G G + DQ+G
Sbjct: 1001 CKPCECDESGSKGFQCDQNG 1020
>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
protein.
Length = 1639
Score = 33.1 bits (72), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Frame = -3
Query: 297 NTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMG---GYSCKW 127
N SG +C C + S + S +C HCR R C G+S +
Sbjct: 946 NIRSGNGCENCLCDPVGSYNSTCDRYSGQC-----HCRPGVMGQRCDQCENYFYGFSSEG 1000
Query: 126 SHQCRVAEDGRPGCRGDQSG 67
C E G G + DQ+G
Sbjct: 1001 CKPCECDESGSKGFQCDQNG 1020
>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
isoform B protein.
Length = 2133
Score = 31.5 bits (68), Expect = 1.1
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 284 PELVLEQSSAPSSSAMPGTPPXXXXXXHTPFWVS 385
P V++QS+AP++ ++P PP H+P +S
Sbjct: 652 PSRVIQQSAAPAAISIPSAPPPPPPAIHSPLDLS 685
>M33753-1|AAA28428.1| 2146|Drosophila melanogaster crumbs protein
protein.
Length = 2146
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 27 VARRTL*KQNAVCRQ-TDRPCSQVCHLLQLCTGATTCSCTHPYTDGTC 167
V + L +N VC Q +PC + L G C CT +T TC
Sbjct: 596 VQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTC 643
>AE014297-3522|AAF56276.1| 2146|Drosophila melanogaster CG6383-PA,
isoform A protein.
Length = 2146
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 27 VARRTL*KQNAVCRQ-TDRPCSQVCHLLQLCTGATTCSCTHPYTDGTC 167
V + L +N VC Q +PC + L G C CT +T TC
Sbjct: 596 VQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTC 643
>AE014297-3521|ABI31202.1| 2189|Drosophila melanogaster CG6383-PB,
isoform B protein.
Length = 2189
Score = 31.1 bits (67), Expect = 1.4
Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +3
Query: 27 VARRTL*KQNAVCRQ-TDRPCSQVCHLLQLCTGATTCSCTHPYTDGTC 167
V + L +N VC Q +PC + L G C CT +T TC
Sbjct: 639 VQNQCLCPENKVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTC 686
>AE014298-1804|AAF48196.2| 3604|Drosophila melanogaster CG4013-PC,
isoform C protein.
Length = 3604
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = -3
Query: 579 HQSLHHYEG--EVSKHSIPWLSTPDSIH*NLICRMAVV----VFLKVNSLESEEQQERHH 418
HQ H +V + +++ H N +CR V + LKV +L ++Q+++ H
Sbjct: 581 HQQQHQRSSPAQVQQQQQQQMNSSRQSH-NDMCRQVVTTPMGMQLKVETLPQQQQKQQQH 639
Query: 417 KTEQTHGLRQGETQ 376
+ +Q +QG +Q
Sbjct: 640 QQQQQQQQQQGRSQ 653
>AE014298-1803|AAN09315.1| 3604|Drosophila melanogaster CG4013-PB,
isoform B protein.
Length = 3604
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = -3
Query: 579 HQSLHHYEG--EVSKHSIPWLSTPDSIH*NLICRMAVV----VFLKVNSLESEEQQERHH 418
HQ H +V + +++ H N +CR V + LKV +L ++Q+++ H
Sbjct: 581 HQQQHQRSSPAQVQQQQQQQMNSSRQSH-NDMCRQVVTTPMGMQLKVETLPQQQQKQQQH 639
Query: 417 KTEQTHGLRQGETQ 376
+ +Q +QG +Q
Sbjct: 640 QQQQQQQQQQGRSQ 653
>AE014298-1802|AAF48195.2| 3604|Drosophila melanogaster CG4013-PA,
isoform A protein.
Length = 3604
Score = 28.7 bits (61), Expect = 7.6
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = -3
Query: 579 HQSLHHYEG--EVSKHSIPWLSTPDSIH*NLICRMAVV----VFLKVNSLESEEQQERHH 418
HQ H +V + +++ H N +CR V + LKV +L ++Q+++ H
Sbjct: 581 HQQQHQRSSPAQVQQQQQQQMNSSRQSH-NDMCRQVVTTPMGMQLKVETLPQQQQKQQQH 639
Query: 417 KTEQTHGLRQGETQ 376
+ +Q +QG +Q
Sbjct: 640 QQQQQQQQQQGRSQ 653
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,747,811
Number of Sequences: 53049
Number of extensions: 748753
Number of successful extensions: 3366
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3346
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -