Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5m10
         (763 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225           32   0.43 
02_03_0097 + 15166077-15166349,15166623-15166694,15166715-151671...    28   9.3  

>05_03_0195 - 9560885-9561435,9561553-9561639,9562199-9563225
          Length = 554

 Score = 32.3 bits (70), Expect = 0.43
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 16  LDFRDLEEGKKEDMFPPKVCQMSIRTADSHIMFRFLN 126
           +DFRDL +   +D +P  +  M I  A  H +  FL+
Sbjct: 160 IDFRDLNKATPKDEYPMPIADMMINDASGHKVISFLD 196


>02_03_0097 +
           15166077-15166349,15166623-15166694,15166715-15167161,
           15167579-15167794,15167873-15168213,15168329-15168947
          Length = 655

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 16  LDFRDLEEGKKEDMFPPKVCQMSIRTADSHIMFRFLN 126
           +DFRDL +    D +P  V    I  A  H    F++
Sbjct: 613 IDFRDLNKATPNDEYPMPVADQLIDVASGHKTLSFMD 649


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,860,039
Number of Sequences: 37544
Number of extensions: 297513
Number of successful extensions: 599
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 599
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)