Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5m01
         (416 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein ...    26   0.63 
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           26   0.63 
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     26   0.63 
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    23   3.4  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   4.5  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         22   7.8  

>CR954257-3|CAJ14154.1|  277|Anopheles gambiae predicted protein
           protein.
          Length = 277

 Score = 25.8 bits (54), Expect = 0.63
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 244 LLQQIQHGPANCYCKFLGKKEH*LYPQRNACHAGR 348
           LL+Q+ HG  +  C  + +K     P R AC  G+
Sbjct: 170 LLRQLNHGGDHAECGQVERKSQPFGPARWACKLGK 204


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 25.8 bits (54), Expect = 0.63
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 125 AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 217
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 118 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 148


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 25.8 bits (54), Expect = 0.63
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 125 AGRFKGLQKSNMVNMPEQQSSTETAAVCKNE 217
           A   K +   ++ N P+QQS+T     C+N+
Sbjct: 119 AAELKNMVLQDISNQPKQQSTTRPLRKCRNK 149


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 40  NVLSVRCVFITNELPGCWALKKYIIKN 120
           +V +VRC      +P   A+KK++I+N
Sbjct: 16  HVKAVRCTNCARCVPKDKAIKKFVIRN 42


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = -3

Query: 162 TMFDFCKPLKRPACILDDIFF*CPTAWQFVCD 67
           TM DF      P C+LD I +     W   C+
Sbjct: 150 TMVDFKLLQVIPYCVLDTITYMMGGYWYMACE 181


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 84  RLLGIKKIYHQEYKRVVSKVYKNQTW*TC 170
           +L+ I  +YH +   V  K YKN    +C
Sbjct: 406 KLIPISVLYHIDESNVNLKKYKNMVVKSC 434


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,657
Number of Sequences: 2352
Number of extensions: 8624
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)