Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l22
         (525 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q38EK2 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q8D7I1 Cluster: Uncharacterized conserved protein; n=54...    32   7.0  
UniRef50_Q4Y9Y5 Cluster: Putative uncharacterized protein; n=1; ...    32   7.0  

>UniRef50_Q38EK2 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 113

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +1

Query: 388 SVQCIVYVMTVIIIIHINSCFLVCYYYIF-FINHC 489
           S+   +Y+ +  III IN CF + Y+ IF FI  C
Sbjct: 21  SIHSFLYIFSFTIIIIINECFFLFYFIIFIFIIFC 55


>UniRef50_Q8D7I1 Cluster: Uncharacterized conserved protein; n=54;
           cellular organisms|Rep: Uncharacterized conserved
           protein - Vibrio vulnificus
          Length = 372

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 10/29 (34%), Positives = 21/29 (72%)
 Frame = -1

Query: 144 IRKLQNTIFAHTYWKYVDQTYLIPEFEQV 58
           +++++ T+F   YW+++DQT L+ E  +V
Sbjct: 280 LKEIEQTVFKTNYWRHIDQTRLLSEQTKV 308


>UniRef50_Q4Y9Y5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 39

 Score = 32.3 bits (70), Expect = 7.0
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +1

Query: 403 VYVMTVIIIIHINSCFLVCYYYIFFINHC 489
           +Y+M+ + I+ IN C+L  YY+  F++ C
Sbjct: 5   LYIMSNLYILWINFCYLTIYYHFNFLHIC 33


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,043,308
Number of Sequences: 1657284
Number of extensions: 10056910
Number of successful extensions: 23193
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21807
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23133
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 33037407449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)