Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l22
         (525 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.077
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   1.6  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   1.6  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   3.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.8  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 0.077
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 397 CIVYVMTVIIIIHINSCFLVCYYYIFFIN 483
           CI Y     I+  ++   LVC YY ++++
Sbjct: 237 CIYYFYYAFILFTVHLLLLVCIYYFYYMH 265



 Score = 27.1 bits (57), Expect = 0.10
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 397 CIVYVMTVIIIIHINSCFLVCYYYIF 474
           CI Y     II  ++  FL+C Y+ F
Sbjct: 145 CIYYFYCAFIIFTVHLLFLLCIYHFF 170



 Score = 25.8 bits (54), Expect = 0.23
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 397 CIVYVMTVIIIIHINSCFLVCYYY 468
           C+ Y     II  ++  FL+C YY
Sbjct: 112 CVYYFYYAFIIFTVHLLFLLCIYY 135



 Score = 20.6 bits (41), Expect = 8.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 424 IIIHINSCFLVCYYYIF 474
           II  ++  FL+C YY +
Sbjct: 273 IIFTMHLLFLLCIYYFY 289


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +3

Query: 3   YYLYFSSFVIRTIVAF---RPPLVQTPVLNMFDLRISNTYAQILCFEVFV 143
           YYLYF   VI T +        ++    L+  D++   T  +  C+++ V
Sbjct: 220 YYLYFDVIVISTFLQLFLEHYEVINRQTLDTADVKTLTTVVEKECYKMKV 269


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = +3

Query: 3   YYLYFSSFVIRTIVAF---RPPLVQTPVLNMFDLRISNTYAQILCFEVFV 143
           YYLYF   VI T +        ++    L+  D++   T  +  C+++ V
Sbjct: 146 YYLYFDVIVISTFLQLFLEHYEVINRQTLDTADVKTLTTVVEKECYKMKV 195


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 339 T*DFYYLCICLSMMAIQCPMYS 404
           T + +YLC C   + +   M+S
Sbjct: 318 TFNLFYLCFCFYWLLVMVAMFS 339


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 339 T*DFYYLCICLSMMAIQCPMYS 404
           T + +YLC C   + +   M+S
Sbjct: 274 TFNLFYLCFCFYWLLVMVAMFS 295


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 273 SFGTKFLMGRCGGCANREKTSVT*DFYYLC 362
           S G  + +  C GCA   K S+  +  Y+C
Sbjct: 45  SSGKHYNIFACDGCAGFFKRSIRRNRQYVC 74


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 273 SFGTKFLMGRCGGCANREKTSVT*DFYYLC 362
           S G  + +  C GCA   K S+  +  Y+C
Sbjct: 45  SSGKHYNIFACDGCAGFFKRSIRRNRQYVC 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,011
Number of Sequences: 336
Number of extensions: 2827
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)