Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l22
         (525 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    25   1.1  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    25   1.1  
Z99281-7|CAC42379.1|   77|Caenorhabditis elegans Hypothetical pr...    25   1.5  
Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical pr...    28   3.6  
CU457740-3|CAM36333.1|  367|Caenorhabditis elegans Hypothetical ...    28   3.6  
Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 438 YMNNNNNRHH 409
           Y NNNNN HH
Sbjct: 23  YNNNNNNHHH 32



 Score = 23.8 bits (49), Expect(2) = 1.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 432 NNNNNRHHVDY 400
           NNNNN HH  Y
Sbjct: 24  NNNNNNHHHHY 34


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 24.6 bits (51), Expect(2) = 1.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 438 YMNNNNNRHH 409
           Y NNNNN HH
Sbjct: 23  YNNNNNNHHH 32



 Score = 23.8 bits (49), Expect(2) = 1.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 432 NNNNNRHHVDY 400
           NNNNN HH  Y
Sbjct: 24  NNNNNNHHHHY 34


>Z99281-7|CAC42379.1|   77|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9c protein.
          Length = 77

 Score = 24.6 bits (51), Expect(2) = 1.5
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -1

Query: 438 YMNNNNNRHH 409
           Y NNNNN HH
Sbjct: 23  YNNNNNNHHH 32



 Score = 23.8 bits (49), Expect(2) = 1.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 432 NNNNNRHHVDY 400
           NNNNN HH  Y
Sbjct: 24  NNNNNNHHHHY 34


>Z81041-6|CAB02788.1|  336|Caenorhabditis elegans Hypothetical
           protein C27A7.7 protein.
          Length = 336

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +1

Query: 388 SVQCIVYVMTVIIIIHINSCFLVCY 462
           S Q I+   T III+ + SCF +C+
Sbjct: 191 STQLILRTSTAIIIVTLISCFTICF 215


>CU457740-3|CAM36333.1|  367|Caenorhabditis elegans Hypothetical
           protein C50E10.3 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = +3

Query: 372 SMMAIQCPMYSLRDDGYYYYSYK*LFLGMLLLYI 473
           S   I  P+Y+L D  Y  Y Y+ L L  LLL I
Sbjct: 9   SFSTIWLPIYTLNDSCYTRYFYRGLLLAELLLSI 42


>Z77132-5|CAB00863.2| 1423|Caenorhabditis elegans Hypothetical protein
            F54D1.6 protein.
          Length = 1423

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +2

Query: 194  RKYWFDRIRYVFI*FSDQSAFSYLMTQFWNEVPYGTMRR 310
            ++Y   R+  VF  F DQS+ SYL T   N+V   T R+
Sbjct: 1031 QRYNLPRVSGVFRPFPDQSSGSYLNTLTLNDVNSETYRQ 1069


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,678,174
Number of Sequences: 27780
Number of extensions: 246132
Number of successful extensions: 573
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)