Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l22
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.47 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    24   1.1  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    24   1.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.4  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    22   4.4  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   5.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   5.8  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   7.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.7  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.0 bits (52), Expect = 0.47
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 165 IMRDSN*IRKLQNTIFAHTYWKYVDQTYLIPEFEQVAVE 49
           ++R+++  + L NT+     WKY+D  +   E  Q A++
Sbjct: 22  VVRENSSGKNLTNTLNVIHKWKYLDYDFDNDERRQAAIQ 60


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = -1

Query: 141 RKLQNTIFAHTYWKYVDQTYLIPEFEQVAVE 49
           R L N++     WKY+D  +   E  Q A++
Sbjct: 23  RNLTNSLKVIYEWKYIDYDFGSDEKRQAAIQ 53


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 141 RKLQNTIFAHTYWKYVDQTYLIPEFEQVAVE 49
           RKL N++     WKY+D  +   E  Q A++
Sbjct: 29  RKLANSMNVIHEWKYLDYDFGSDERRQAAMQ 59


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 202 IFAYRNIFKPKHNYAR 155
           +F Y NIFK   N AR
Sbjct: 360 VFLYYNIFKALRNRAR 375


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 403 VYVMTVIIIIHINSCFLVCYYYIFFINH 486
           ++V T+    +     L+ YYY   ++H
Sbjct: 210 IFVATIFTFSYCIPMILIIYYYSQIVSH 237


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 45  AFRPPLVQTPVLNMFDLRISNTYAQ 119
           AF  P++ T +    DL +++TY +
Sbjct: 249 AFAVPIINTLLERSVDLVVTSTYCE 273


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/31 (25%), Positives = 17/31 (54%)
 Frame = -1

Query: 141 RKLQNTIFAHTYWKYVDQTYLIPEFEQVAVE 49
           + L++++     WKY+D  +   E  Q A++
Sbjct: 29  KNLEHSMNVIHEWKYIDYDFGSDEKRQAAIQ 59


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 388 SVQCIVYVMTVIIIIHINSCFLVCYY 465
           SV+CIV+    I+ +   +   VC Y
Sbjct: 136 SVECIVFNSGTILCVPFTTYTPVCEY 161


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -1

Query: 141 RKLQNTIFAHTYWKYVDQTYLIPEFEQVAVE 49
           R L+ ++     WKY D  +   E  Q A++
Sbjct: 26  RNLEKSLNVIHEWKYFDYDFGSEERRQAAIQ 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,316
Number of Sequences: 438
Number of extensions: 3555
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)