Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5l17
(681 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 388 e-107
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 388 e-107
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 388 e-107
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 388 e-107
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 388 e-107
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 388 e-107
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 388 e-107
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 388 e-107
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 388 e-107
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 387 e-107
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 387 e-107
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 386 e-107
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 386 e-107
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 386 e-107
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 244 2e-64
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 9e-59
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 208 1e-53
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 167 4e-41
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 163 5e-40
AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens ... 31 2.9
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 388 bits (954), Expect = e-107
Identities = 189/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 387 bits (952), Expect = e-107
Identities = 186/210 (88%), Positives = 196/210 (93%)
Frame = +1
Query: 52 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 231
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 232 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 411
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 412 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 591
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 592 KVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
KVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 213
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 387 bits (952), Expect = e-107
Identities = 186/210 (88%), Positives = 196/210 (93%)
Frame = +1
Query: 52 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 231
ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGR
Sbjct: 4 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 63
Query: 232 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 411
RIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLR
Sbjct: 64 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 123
Query: 412 FIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGI 591
FIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGI
Sbjct: 124 FIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGI 183
Query: 592 KVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
KVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 184 KVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 213
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 386 bits (951), Expect = e-107
Identities = 188/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISK+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 386 bits (950), Expect = e-107
Identities = 188/215 (87%), Positives = 199/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 386 bits (949), Expect = e-107
Identities = 188/215 (87%), Positives = 198/215 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 396
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRAC 119
Query: 397 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQ 576
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQ
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
Query: 577 GVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPK 681
GVLGIKVKIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 180 GVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPK 214
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 244 bits (598), Expect = 2e-64
Identities = 115/129 (89%), Positives = 120/129 (93%)
Frame = +1
Query: 295 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 474
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 475 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQP 654
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD GK GPKKP P
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLP 120
Query: 655 DHILVTEPK 681
DH+ + EPK
Sbjct: 121 DHVSIVEPK 129
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 9e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +1
Query: 223 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 402
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 403 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 582
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 583 LGIKVKI 603
V +
Sbjct: 126 WDTSVHL 132
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 208 bits (509), Expect = 1e-53
Identities = 105/118 (88%), Positives = 111/118 (94%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 390
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 167 bits (405), Expect = 4e-41
Identities = 84/96 (87%), Positives = 89/96 (92%)
Frame = +1
Query: 37 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 216
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 217 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRG 324
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 163 bits (396), Expect = 5e-40
Identities = 75/88 (85%), Positives = 79/88 (89%)
Frame = +1
Query: 418 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 597
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 598 KIMLPWDQQGKNGPKKPQPDHILVTEPK 681
KIMLPWD GK GPKKP PDH+ + EPK
Sbjct: 61 KIMLPWDPTGKIGPKKPLPDHVSIVEPK 88
>AK127619-1|BAC87060.1| 237|Homo sapiens protein ( Homo sapiens
cDNA FLJ45717 fis, clone FELNG2001613. ).
Length = 237
Score = 31.5 bits (68), Expect = 2.9
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +3
Query: 561 CASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGN 671
CAS RS R Q Q P P A RP PG+
Sbjct: 114 CASSDRSLREQKQRRAGPDPTPSPAPPPAGPRPSPGS 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,891,235
Number of Sequences: 237096
Number of extensions: 2468485
Number of successful extensions: 9934
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9933
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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