Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l08
         (701 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL445189-2|CAH71699.1|  703|Homo sapiens RP11-787I22.1 protein.        32   2.3  
AL390208-1|CAI16717.2|  867|Homo sapiens armadillo repeat contai...    32   2.3  
AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    32   2.3  
BC040196-1|AAH40196.1|  408|Homo sapiens CLIC6 protein protein.        30   7.0  
AK092733-1|BAC03959.1|  175|Homo sapiens protein ( Homo sapiens ...    30   7.0  
AF448439-1|AAN76730.1|  704|Homo sapiens chloride channel form B...    30   7.0  
AF448438-1|AAN76729.1|  686|Homo sapiens chloride channel form A...    30   7.0  
AF426169-1|AAL24813.1|  138|Homo sapiens chloride intracellular ...    30   7.0  

>AL445189-2|CAH71699.1|  703|Homo sapiens RP11-787I22.1 protein.
          Length = 703

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/78 (23%), Positives = 38/78 (48%)
 Frame = +1

Query: 52  KRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTK 231
           K + N   D++ +   +   +L+++R  D   N +   Y + S+        FL+EM++K
Sbjct: 193 KISRNEKNDSLIQNDSILESLLEVLRSEDLQTNMEAFLYCMGSIKFISGNLGFLNEMISK 252

Query: 232 KLIESNAMVFDETNKNLK 285
             +E    +  + N+N+K
Sbjct: 253 GAVEILINLIKQINENIK 270


>AL390208-1|CAI16717.2|  867|Homo sapiens armadillo repeat
           containing 2 protein.
          Length = 867

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/78 (23%), Positives = 38/78 (48%)
 Frame = +1

Query: 52  KRNMNTSVDAVTKLIRLQNDVLDMMREVDQYLNSDTPDYTIESLNAPGKQFDFLDEMLTK 231
           K + N   D++ +   +   +L+++R  D   N +   Y + S+        FL+EM++K
Sbjct: 358 KISRNEKNDSLIQNDSILESLLEVLRSEDLQTNMEAFLYCMGSIKFISGNLGFLNEMISK 417

Query: 232 KLIESNAMVFDETNKNLK 285
             +E    +  + N+N+K
Sbjct: 418 GAVEILINLIKQINENIK 435


>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 20/103 (19%), Positives = 43/103 (41%)
 Frame = +3

Query: 306 HMFKSLYKFNYXKTLCTIIWVFILQHLCI*NYNCYYTDNSDYRRCRLCRLDATRRRNKIN 485
           H++  +Y   Y   +C  + V++  H C+    C YT      R R C       R   +
Sbjct: 66  HVYAYMYVRTYIHIMCMHVCVYVCVHACMCVCTCAYTHVFVCVRVRTC----VYMRTHTH 121

Query: 486 *QIFSKSLLQVLLCSRLIIFLSYNAIIINSLFLKNVVVICNVY 614
             +++ +   + +C R+  ++   A I   ++++  + I   Y
Sbjct: 122 ICVYACACAHMCVCVRVHTYVCMRAYIHAYMYVRTYICIFMFY 164


>BC040196-1|AAH40196.1|  408|Homo sapiens CLIC6 protein protein.
          Length = 408

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +1

Query: 103 QNDVLDMMREVDQYLNSDTPD----YTIESLNAPGKQFDFLDEM 222
           + ++L  +R++D YLNS  PD    Y+ E +   G++F   DE+
Sbjct: 297 EKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDEL 340


>AK092733-1|BAC03959.1|  175|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35414 fis, clone SMINT2000609, highly similar to
           Oryctolagus cuniculus mRNA for parchorin. ).
          Length = 175

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +1

Query: 103 QNDVLDMMREVDQYLNSDTPD----YTIESLNAPGKQFDFLDEM 222
           + ++L  +R++D YLNS  PD    Y+ E +   G++F   DE+
Sbjct: 64  EKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDEL 107


>AF448439-1|AAN76730.1|  704|Homo sapiens chloride channel form B
           protein.
          Length = 704

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +1

Query: 103 QNDVLDMMREVDQYLNSDTPD----YTIESLNAPGKQFDFLDEM 222
           + ++L  +R++D YLNS  PD    Y+ E +   G++F   DE+
Sbjct: 593 EKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDEL 636


>AF448438-1|AAN76729.1|  686|Homo sapiens chloride channel form A
           protein.
          Length = 686

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +1

Query: 103 QNDVLDMMREVDQYLNSDTPD----YTIESLNAPGKQFDFLDEM 222
           + ++L  +R++D YLNS  PD    Y+ E +   G++F   DE+
Sbjct: 575 EKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDEL 618


>AF426169-1|AAL24813.1|  138|Homo sapiens chloride intracellular
           channel 6 protein.
          Length = 138

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
 Frame = +1

Query: 103 QNDVLDMMREVDQYLNSDTPD----YTIESLNAPGKQFDFLDEM 222
           + ++L  +R++D YLNS  PD    Y+ E +   G++F   DE+
Sbjct: 27  EKNLLKALRKLDNYLNSPLPDEIDAYSTEDVTVSGRKFLDGDEL 70


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,843,695
Number of Sequences: 237096
Number of extensions: 1448727
Number of successful extensions: 3367
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3367
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)