Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l07
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    27   0.19 
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   3.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   9.5  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   9.5  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 89  TNKHANKNNNRKSSESHDTPILY 21
           T K    NNN KSS+S + P +Y
Sbjct: 179 TEKAGTNNNNSKSSQSSNPPQIY 201


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 618 GDLKRPFDKASKDYE 662
           G+L+R FDK  K++E
Sbjct: 167 GELRRAFDKEGKNWE 181


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 438 APVFVKDTSRCPRGHFRNCVWLLSPSSVSLGHRGRNPVSLLER 310
           +PVF K     P     N  +L+SP S + G  G  PVS+  +
Sbjct: 70  SPVFGK-VEPVPHTSSFNMGYLVSPYSYANGAAGPIPVSMASK 111


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 565 MLLMFCIRVFISADSSFVTT 506
           M  +FCI V   A  S +TT
Sbjct: 501 MTCLFCINVLAEACGSDITT 520


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 373 KPYTIPEMPT 402
           KPYT P +PT
Sbjct: 136 KPYTPPRLPT 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,018
Number of Sequences: 336
Number of extensions: 3245
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)