Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc5l06
(673 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0644 + 19181335-19184424 167 9e-42
05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520 161 5e-40
01_01_0124 - 1145105-1145320,1145480-1145611,1146485-1146562,114... 49 4e-06
07_01_0453 + 3420727-3420800,3421666-3421792,3422348-3422431,342... 48 5e-06
02_01_0623 - 4676847-4676879,4676953-4677115,4677467-4677620,467... 44 1e-04
06_03_0921 + 25949453-25949986,25950150-25950188,25950380-259504... 40 0.001
03_05_0776 + 27625122-27625415,27627226-27627273,27627455-276275... 40 0.001
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 40 0.002
03_02_0919 - 12392471-12392636,12392740-12392931,12393366-123934... 40 0.002
03_01_0081 + 645214-645228,645791-645856,645973-646142,646265-64... 30 1.5
06_03_0869 + 25548853-25549074,25549191-25549251,25549912-255500... 29 3.4
02_05_0941 + 32953065-32953089,32954252-32954406,32954486-329545... 29 3.4
12_01_0644 - 5454823-5455710 28 5.9
09_06_0338 - 22398826-22399470 28 5.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 28 7.8
>09_04_0644 + 19181335-19184424
Length = 1029
Score = 167 bits (405), Expect = 9e-42
Identities = 88/195 (45%), Positives = 106/195 (54%), Gaps = 11/195 (5%)
Frame = +1
Query: 121 EYLQEIEKKVQERWESQKIFEVEAPDDGKSH-EKFLCTFPYPYMNGRLHLGHTFSLSKCE 297
+ L +I+ Q+ WE K+FE E + EKF FPYPYMNG LHLGH FSLSK E
Sbjct: 15 DILLKIQSDAQKWWEESKVFEAEPGNKPPGPGEKFFGNFPYPYMNGLLHLGHAFSLSKLE 74
Query: 298 FACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKREMAVYGCPPVFPE---DEELIVKDE 468
F Y RL+G VL PF FHCTGMPIKA ADKL RE YG PP FPE D V D
Sbjct: 75 FGAAYQRLRGSNVLLPFAFHCTGMPIKASADKLSREAQQYGYPPAFPEVEDDSSAEVADS 134
Query: 469 -------DIIPXXXXXXXXXXXXXXXXXXXYQWQIMKSIGVPEEEIKEFANESYWLEYFP 627
++P +QW+IM+ G+ +EEI +F + +WL YFP
Sbjct: 135 SQADNAASVVP-DKFKSKKSKAASKVGMQKFQWEIMRGFGLSDEEIAKFQDPYHWLTYFP 193
Query: 628 PRAVTDLKRMGIHVD 672
P A DLK G+ D
Sbjct: 194 PLAKEDLKAFGLGCD 208
>05_03_0109 + 8490841-8490940,8492098-8493057,8494055-8495520
Length = 841
Score = 161 bits (391), Expect = 5e-40
Identities = 85/194 (43%), Positives = 110/194 (56%), Gaps = 10/194 (5%)
Frame = +1
Query: 121 EYLQEIEKKVQERWESQKIFEVEAPDDGKSH-EKFLCTFPYPYMNGRLHLGHTFSLSKCE 297
+ L +I+ +VQ+ WE K+FE +A D S EKF F YPYMNG LHLGH F+LSK E
Sbjct: 52 DLLLKIQSEVQKCWEENKVFEAKAGDTPPSPGEKFFGNFTYPYMNGMLHLGHAFTLSKLE 111
Query: 298 FACRYYRLKGRMVLFPFGFHCTGMPIKACADKLKREMAVYGCPPVFP---EDEELIVKDE 468
FA Y+RL G VL PF FHCTGMPIK ADKL +E+ YG PPV P ++ + + ++
Sbjct: 112 FAAAYHRLHGSNVLLPFAFHCTGMPIKPSADKLGKEIQQYGNPPVLPPANKNSKFELTND 171
Query: 469 DII------PXXXXXXXXXXXXXXXXXXXYQWQIMKSIGVPEEEIKEFANESYWLEYFPP 630
I QW+IM+S G+ + EI EF N +WL YFPP
Sbjct: 172 RIYGQTTASAQDKYRSKRSKSVAKSGSYKSQWEIMRSFGIADGEIVEFQNLHHWLSYFPP 231
Query: 631 RAVTDLKRMGIHVD 672
A+ DL+ G+ D
Sbjct: 232 LAMEDLEDFGLSCD 245
>01_01_0124 -
1145105-1145320,1145480-1145611,1146485-1146562,
1147022-1147199,1147269-1147441,1147531-1147632,
1147717-1147794,1148178-1148259,1148343-1148405,
1150196-1150275,1150529-1150723,1150812-1151073,
1151566-1151720,1151799-1151865,1151956-1152179,
1152322-1152451,1153228-1153284,1153396-1153527,
1153758-1154086
Length = 910
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Frame = +1
Query: 133 EIEKKVQERWESQKIFEVEAPDDGKSHEKFLC----TFPYPYMNGRLHLGHTFSLSKCEF 300
EIE + Q WE + F G K C FPYP G LH+GH + +
Sbjct: 69 EIEPRWQRHWEEHRTFRTPDIGHGLDTSKPKCYILDMFPYPSGAG-LHVGHPLGYTATDI 127
Query: 301 ACRYYRLKGRMVLFPFGFHCTGMP 372
R+ R++G VL P G+ G+P
Sbjct: 128 LSRFKRMQGFNVLHPMGWDAFGLP 151
>07_01_0453 +
3420727-3420800,3421666-3421792,3422348-3422431,
3422550-3422644,3423063-3423154,3423326-3423379,
3424221-3424273,3424472-3424539,3424777-3424852,
3425159-3425242,3425793-3425941,3426375-3426492,
3426583-3426699,3426950-3427170,3427503-3427536,
3427585-3427685,3427832-3427943,3428379-3428504,
3428579-3428716,3428808-3428858,3428938-3429050,
3430253-3430318,3430582-3430729,3430826-3430930,
3431017-3431118,3431495-3431567,3431647-3431813,
3431906-3432028
Length = 956
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/80 (30%), Positives = 42/80 (52%)
Frame = +1
Query: 157 RWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYYRLKGRMV 336
+WESQ F+ P+ + + F+ P P + G LH+GH ++ + RY+R+KGR
Sbjct: 25 QWESQGFFK---PNFDRGGDPFVIPMPPPNVTGSLHMGHAMFVTLEDIMVRYFRMKGRPA 81
Query: 337 LFPFGFHCTGMPIKACADKL 396
L+ G G+ + +K+
Sbjct: 82 LWLPGTDHAGIATQLVVEKM 101
>02_01_0623 -
4676847-4676879,4676953-4677115,4677467-4677620,
4678413-4678554,4678641-4678706,4679389-4679922
Length = 363
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/88 (27%), Positives = 39/88 (44%)
Frame = +1
Query: 139 EKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYYR 318
E++V WE F + E P P+ G H GH + S + R++
Sbjct: 16 EERVLRLWEELDAFHEQLRRTAGGEEFVFYDGP-PFATGLPHYGHLLAGSIKDAVARHHA 74
Query: 319 LKGRMVLFPFGFHCTGMPIKACADKLKR 402
++GR V FG+ C G+P++ D+ R
Sbjct: 75 MRGRHVARRFGWDCHGVPVERAVDEALR 102
>06_03_0921 +
25949453-25949986,25950150-25950188,25950380-25950445,
25950526-25950669,25951416-25951612,25952281-25952443,
25952760-25952873,25953304-25953401,25953964-25954042,
25954356-25954514,25954690-25954779,25955790-25955923,
25956513-25956672,25956826-25956909,25957000-25957167,
25957321-25957446,25958088-25958225,25958311-25958414,
25958832-25958895,25959229-25959317,25959393-25959534,
25959937-25960000,25960085-25960152,25960399-25960521,
25960604-25960669,25960857-25960962,25961076-25961167,
25961243-25961344
Length = 1170
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/85 (28%), Positives = 40/85 (47%)
Frame = +1
Query: 139 EKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYYR 318
E++V + W F E K E+F+ P+ G H GH + + + R+
Sbjct: 16 EERVLKLWSELDAFH-EQLRRTKGGEEFIFYDGPPFATGLPHYGHILAGTIKDVVTRHQS 74
Query: 319 LKGRMVLFPFGFHCTGMPIKACADK 393
++GR V FG+ C G+P++ DK
Sbjct: 75 MRGRHVSRRFGWDCHGLPVEFEIDK 99
>03_05_0776 +
27625122-27625415,27627226-27627273,27627455-27627514,
27627633-27627802,27627901-27627973,27628096-27628161,
27628262-27628345,27628681-27628758,27629009-27629092,
27629835-27630137,27630227-27630397,27630971-27631161,
27631284-27631686,27632246-27632497,27632577-27633077,
27633181-27633278,27633400-27633499,27633722-27633867,
27633973-27634138
Length = 1095
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 136 IEKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYY 315
+EK WES F +A S F+ P P + G LH+GH +++ + R+
Sbjct: 188 VEKSWYSWWESSGYFGADA---ASSKPPFVIVLPPPNVTGALHIGHALTVAIEDSMIRWR 244
Query: 316 RLKGRMVLFPFGFHCTGMPIKACAD-KLKRE 405
R+ G L+ G G+ + + KL RE
Sbjct: 245 RMSGYNTLWVPGVDHAGIATQVVVEKKLMRE 275
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/86 (26%), Positives = 39/86 (45%)
Frame = +1
Query: 136 IEKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYY 315
+EK WES + F +A S F+ P P + G LH+GH +++ + R+
Sbjct: 93 VEKSWYSWWESSQYFVADATS---SKPPFVIILPPPNVTGVLHIGHAITVAIEDAMIRWR 149
Query: 316 RLKGRMVLFPFGFHCTGMPIKACADK 393
R+ G L+ G G+ + +K
Sbjct: 150 RMSGYNALWVPGMDHAGIATQVVVEK 175
>03_02_0919 -
12392471-12392636,12392740-12392931,12393366-12393463,
12393719-12394219,12394287-12394532,12395627-12396029,
12396155-12396348,12396755-12396925,12397064-12397366,
12397463-12397520,12397678-12397757,12398910-12398987,
12399530-12399613,12399692-12399757,12399908-12399980,
12400080-12400249,12400368-12400427,12400632-12400679,
12401217-12401255,12401364-12401372
Length = 1012
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +1
Query: 136 IEKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRYY 315
+EK WES F D + F+ P P + G LH+GH +++ + R+
Sbjct: 106 VEKSWYAWWESSGYFRA---DSASTKPPFVIVMPPPNVTGALHIGHALTVAIEDAMIRWR 162
Query: 316 RLKGRMVLFPFGFHCTGMPIKACAD-KLKRE 405
R+ G L+ G G+ + + KL RE
Sbjct: 163 RMSGYNALWVPGVDHAGIATQVVVEKKLMRE 193
>03_01_0081 +
645214-645228,645791-645856,645973-646142,646265-646319,
646434-646499,646604-646687,647091-647168,647425-647508,
648000-648302,648402-648572,649098-649288,649406-649808,
650368-650619,650696-651196,651306-651403,651810-651911,
652016-652178
Length = 933
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +1
Query: 235 PYPYMNGRLHLGHTFSLSKCEFACRYYRLKGRMVLFPFGFHCTGMPIKACAD-KLKRE 405
P P + G LH+GH +++ + R+ R+ G L+ G G+ + + KL RE
Sbjct: 105 PPPNVTGALHIGHALTVAIEDAIIRWRRMSGYNALWVPGVDHAGIATQVVVEKKLMRE 162
>06_03_0869 +
25548853-25549074,25549191-25549251,25549912-25550006,
25550094-25550127,25550551-25550605,25550687-25550729,
25551064-25551135
Length = 193
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 184 VEAPDDGKSHEK---FLCTFPYPYMNGRLHLGHTFSLSKCE 297
+E PDD +H K F C P +GRL++G + CE
Sbjct: 136 IEGPDDMPAHIKSSMFGCALTIPITDGRLNMGTWQGIWLCE 176
>02_05_0941 +
32953065-32953089,32954252-32954406,32954486-32954587,
32955089-32955140,32955237-32955349,32955542-32955610,
32955942-32956049,32956517-32956661,32957245-32957476,
32957567-32957853,32957951-32958087,32958520-32958667,
32959464-32959595,32960239-32960367,32960707-32960834,
32960911-32961075,32961462-32961587,32962088-32962161,
32962285-32962534,32962875-32963054,32963128-32963361,
32964771-32964840,32965065-32965177,32965403-32965511,
32965639-32965688,32965823-32965889,32966131-32966203,
32966393-32966448,32966729-32966831,32967377-32967458,
32967717-32967779,32967918-32967977,32968356-32968448,
32968561-32968623,32968699-32968797
Length = 1363
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 139 EKKVQERWESQKIFEVEAPDDGKSHEKFLCTFPYPYMNGRLHLGHTFSLSKCEFACRY 312
E ++Q+ WE ++ ++ + + F+ PY NG LH+GH + + RY
Sbjct: 38 EPELQKLWEENQV--LKRVSERNTGATFVLHDGPPYANGDLHMGHALNKILKDIINRY 93
>12_01_0644 - 5454823-5455710
Length = 295
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +1
Query: 358 CTGMPIKACADKLKREMAVYGCPPVFPEDE-ELIVKD 465
CT P A A +A+ G PPVF E E +LI+ D
Sbjct: 176 CTSQPDLAAAAAASCRLALRGLPPVFHEVEWDLIMVD 212
>09_06_0338 - 22398826-22399470
Length = 214
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3
Query: 434 NTGGQPYTAISRFSLSAQALIGIPV 360
N+G QP A+S F +A L+ +PV
Sbjct: 154 NSGNQPAMALSAFGSAAAGLVSVPV 178
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 424 PPVFPEDEELIVKDEDIIP 480
PP+ PEDEEL+ DE + P
Sbjct: 344 PPMAPEDEELLRDDEVLTP 362
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992,489
Number of Sequences: 37544
Number of extensions: 374636
Number of successful extensions: 958
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1703141568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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