Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l05
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6T8D0 Cluster: Putative uncharacterized protein; n=1; ...    33   4.8  
UniRef50_Q3K4T4 Cluster: Disulfide bond formation protein B 2; n...    33   6.4  
UniRef50_A2XFX8 Cluster: Putative uncharacterized protein; n=1; ...    33   8.4  

>UniRef50_Q6T8D0 Cluster: Putative uncharacterized protein; n=1;
           Helianthus annuus|Rep: Putative uncharacterized protein
           - Helianthus annuus (Common sunflower)
          Length = 153

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
 Frame = +3

Query: 63  FQIEIYNKFYCSA---YCFILKTVFCVSLVLLMVLNLHFPF 176
           F ++I+NK  C +   + F+ K V  V+LVLL+++NL  PF
Sbjct: 102 FIVKIFNKCGCVSLFLFLFMFKVVSVVNLVLLILVNLSVPF 142


>UniRef50_Q3K4T4 Cluster: Disulfide bond formation protein B 2; n=1;
           Pseudomonas fluorescens PfO-1|Rep: Disulfide bond
           formation protein B 2 - Pseudomonas fluorescens (strain
           PfO-1)
          Length = 183

 Score = 33.1 bits (72), Expect = 6.4
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = +3

Query: 531 TCAVSRRQLITSPDLQVLAHCRPGRDLEHHSLKAWTCAMSR 653
           T A  R+ L  S  LQ LAHC P  + E  S   W CA+ R
Sbjct: 81  TTAAWRQVLFQSDSLQELAHCAPNPE-EMFSSLPWLCALMR 120


>UniRef50_A2XFX8 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (indica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. indica
           (Rice)
          Length = 156

 Score = 32.7 bits (71), Expect = 8.4
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -3

Query: 64  NHYFVIILNKFTPPSSNG 11
           N YFV+++N++ PPSSNG
Sbjct: 105 NIYFVVLINRYIPPSSNG 122


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,766,593
Number of Sequences: 1657284
Number of extensions: 9160641
Number of successful extensions: 22165
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22160
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)