Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc5l05
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p pro...    32   0.83 
AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA...    32   0.83 
BT001551-1|AAN71306.1|  360|Drosophila melanogaster RE11603p pro...    29   4.4  
AY051786-1|AAK93210.1|  349|Drosophila melanogaster LD30520p pro...    29   4.4  
AE014297-1883|AAF55085.1|  349|Drosophila melanogaster CG3508-PA...    29   4.4  
AE014297-1882|AAN13614.1|  360|Drosophila melanogaster CG3508-PB...    29   4.4  

>BT010305-1|AAQ23623.1| 1124|Drosophila melanogaster GM01353p
           protein.
          Length = 1124

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 515 HHSPYDLRRKSPPAYHEPGPSGACSLPA 598
           H SPYDLRRK   + HE  P+ + S  A
Sbjct: 135 HQSPYDLRRKISASSHEQWPTSSSSAVA 162


>AE014297-1050|AAF54459.1| 1182|Drosophila melanogaster CG9461-PA
           protein.
          Length = 1182

 Score = 31.9 bits (69), Expect = 0.83
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +2

Query: 515 HHSPYDLRRKSPPAYHEPGPSGACSLPA 598
           H SPYDLRRK   + HE  P+ + S  A
Sbjct: 193 HQSPYDLRRKISASSHEQWPTSSSSAVA 220


>BT001551-1|AAN71306.1|  360|Drosophila melanogaster RE11603p
           protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 545 SPPAYHEPGPSGACSLPARKRP 610
           SPP+   P PS AC L AR++P
Sbjct: 232 SPPSAVAPTPSSACELQARQQP 253


>AY051786-1|AAK93210.1|  349|Drosophila melanogaster LD30520p
           protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 545 SPPAYHEPGPSGACSLPARKRP 610
           SPP+   P PS AC L AR++P
Sbjct: 221 SPPSAVAPTPSSACELQARQQP 242


>AE014297-1883|AAF55085.1|  349|Drosophila melanogaster CG3508-PA,
           isoform A protein.
          Length = 349

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 545 SPPAYHEPGPSGACSLPARKRP 610
           SPP+   P PS AC L AR++P
Sbjct: 221 SPPSAVAPTPSSACELQARQQP 242


>AE014297-1882|AAN13614.1|  360|Drosophila melanogaster CG3508-PB,
           isoform B protein.
          Length = 360

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 545 SPPAYHEPGPSGACSLPARKRP 610
           SPP+   P PS AC L AR++P
Sbjct: 232 SPPSAVAPTPSSACELQARQQP 253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,055,236
Number of Sequences: 53049
Number of extensions: 421842
Number of successful extensions: 981
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)